CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69447	Canola	cytosol	97.61	96.46
Bra008617.1-P	Field mustard	cytosol	97.44	96.45
CDX78694	Canola	cytosol	73.04	74.31
CDX70697	Canola	cytosol	73.72	73.85
AT5G16500.1	Thale cress	cytosol	79.86	73.58
CDY51533	Canola	cytosol	58.87	62.61
CDY28710	Canola	cytosol	59.04	62.57
CDX74234	Canola	cytosol	58.7	60.56
CDX92014	Canola	cytosol	58.53	60.28
CDY03295	Canola	cytosol	35.32	54.76
CDY39784	Canola	cytosol, plastid	35.15	54.5
GSMUA_Achr5P29320_001	Banana	cytosol	33.45	53.7
CDY57665	Canola	cytosol	25.77	52.61
CDY65598	Canola	cytosol	34.98	52.56
GSMUA_Achr6P15570_001	Banana	cytosol	33.79	51.83
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	30.38	51.59
GSMUA_Achr8P02730_001	Banana	cytosol	32.25	50.67
CDY04867	Canola	plastid	32.42	50.53
CDY55687	Canola	plastid	32.25	50.4
CDY47330	Canola	cytosol	32.76	50.39
CDY01117	Canola	cytosol	32.76	50.39
CDX82241	Canola	cytosol	31.23	49.19
CDY36035	Canola	cytosol	31.06	48.92
CDX93611	Canola	cytosol	32.76	48.12
CDY05311	Canola	cytosol	36.01	47.85
CDY29433	Canola	mitochondrion	30.2	47.71
CDY66752	Canola	cytosol	35.32	47.59
CDY19633	Canola	cytosol, mitochondrion	29.86	47.43
GSMUA_Achr10P...	Banana	cytosol, plastid	34.47	47.42
CDX96628	Canola	cytosol	30.38	47.21
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	37.2	47.19
CDY33638	Canola	cytosol	30.38	47.09
CDY34917	Canola	cytosol	35.15	46.5
CDY08017	Canola	cytosol	34.98	46.38
CDX74065	Canola	cytosol	34.98	46.38
CDX85669	Canola	cytosol	33.96	46.06
TraesCS3D01G543300.1	Wheat	cytosol	31.23	45.98
CDX91145	Canola	cytosol	33.96	45.96
CDY31493	Canola	cytosol	29.35	45.74
CDX85945	Canola	cytosol	29.69	45.67
CDX88927	Canola	cytosol	34.47	45.5
CDX68101	Canola	cytosol	29.52	45.41
CDX95117	Canola	cytosol	32.76	45.28
CDY06282	Canola	cytosol	32.59	45.26
CDY29515	Canola	cytosol	29.35	45.14
CDY55594	Canola	plastid	27.99	45.05
HORVU3Hr1G117850.1	Barley	cytosol	30.72	45.0
CDY43074	Canola	mitochondrion	27.82	44.9
CDY32811	Canola	cytosol	32.25	44.89
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	33.11	44.8
TraesCS3B01G603300.1	Wheat	cytosol, plastid	31.4	44.77
CDX88266	Canola	cytosol, nucleus, plastid	29.18	44.65
TraesCS3A01G537900.1	Wheat	cytosol	31.23	44.63
CDX87608	Canola	cytosol	29.01	44.39
CDX69664	Canola	cytosol	34.13	43.96
CDX97232	Canola	cytosol	34.13	43.96
CDY24861	Canola	cytosol, plastid	29.01	43.81
CDX78510	Canola	cytosol	32.94	43.57
CDY22717	Canola	cytosol	32.76	43.44
CDY25327	Canola	cytosol, plastid	29.01	43.26
CDY47164	Canola	cytosol, plastid	29.01	43.26
CDX70830	Canola	cytosol	34.47	43.16
CDX92596	Canola	plastid	33.96	42.07
KRH68843	Soybean	cytosol	41.47	41.9
TraesCS1D01G067700.1	Wheat	plastid	31.91	41.74
EES17638	Sorghum	peroxisome, plastid	31.74	41.61
TraesCS1B01G085000.1	Wheat	plastid	31.74	41.61
HORVU1Hr1G013840.1	Barley	mitochondrion	31.57	41.57
Solyc05g055860.2.1	Tomato	cytosol	34.47	41.56
CDY13906	Canola	plastid	34.3	41.53
Os05t0125400-00	Rice	cytosol	31.06	41.36
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	31.4	41.07
KRG97093	Soybean	cytosol	41.3	40.74
CDY07261	Canola	cytosol, plastid	17.75	40.47
Solyc04g050970.2.1	Tomato	plastid	38.74	40.46
PGSC0003DMT400060019	Potato	cytosol	34.47	40.32
PGSC0003DMT400031291	Potato	cytosol	38.4	40.18
CDX83297	Canola	cytosol	29.52	40.14
CDY53627	Canola	cytosol	33.62	40.04
CDX95766	Canola	cytosol	29.35	40.0
Zm00001d041938_P001	Maize	plastid	31.74	38.99
KRG92591	Soybean	cytosol	38.57	36.51
KRH34195	Soybean	cytosol	38.57	35.93
CDY58830	Canola	nucleus	32.25	33.87
CDY07262	Canola	cytosol	2.73	27.12
CDY24650	Canola	mitochondrion	35.84	17.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078IYS8	UniProt:A0A078IYS8	EnsemblPlants:CDY55581
ProteinID:CDY55581	ProteinID:CDY55581.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00017043001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE3A1F	SEG:seg	:	:	:	:

Description

BnaC09g41430DBnaC09g41430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYS8]

Coordinates

chrLK033413:-:50710..52991

Molecular Weight (calculated)

66066.6 Da

IEP (calculated)

4.486

GRAVY (calculated)

-0.889

Length

586 amino acids

Sequence
(BLAST)

001: MNCFPCFNSQ RNRNLSCKNG TNEHDDHDFR PPVATTKHVE ERETEQTPLK TFNFRELAMA TKNFRQECLI GEGGFGKVYK GTLQSTGQVV AVKQLDKHGL
101: HGNKEFQTQI LSLDKLQHPN LVKLIGYCAD GDQRLLVYEY FSSVSLQDHL YEQKPSHKHM DWITRMKIAF GAAEGLDYLH DKVNPPVIYR DLKASNVLLD
201: DEFYPRLCDF GLQILSPGGG DSLFLSSRVM DTYGYSAPEY TRGEEVTIKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFRD PTRYPDMADP
301: LLRKKFSERG LNQAVAITSM CLQDEPSARP LISDVMVALS FLSMSTDGVP TAVPVSSFRD KSMSIALSRH GSCSVVPFSL PRKEEEDASS VSSSDSEDEE
401: EQEEESRSMK KQDEETKGND SEDESDSNSE KDQEEEQDSP QLEKARSSSS SSDSGSERRR SIEETNATAQ SLKIKYGYSS EEEDNERLSS KSSFKSNGES
501: LLSLRFDSER NHNDSSNNTS MRVNSLAHDD DDEEEENHEN RLEHIHSSKS EVQSIYSDDN TCEGSGDSSL RRIEPEEEDH DSSDQE

Best Arabidopsis Sequence Match ( AT5G16500.1 )
(BLAST)

001: MIIMMNCFPC FTSQKSRNAP CTTNETNDDN VEHDEFRPPV VATTKRTEER EPAEQQPPVK TFNFRELATA TKNFRQECLL GEGGFGRVYK GTLQSTGQLV
101: AVKQLDKHGL HGNKEFLAEV LSLAKLEHPN LVKLIGYCAD GDQRLLVFEY VSGGSLQDHL YEQKPGQKPM DWITRMKIAF GAAQGLDYLH DKVTPAVIYR
201: DLKASNILLD AEFYPKLCDF GLHNLEPGTG DSLFLSSRVM DTYGYSAPEY TRGDDLTVKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFKD
301: PKRYPDMADP LLRKNFSERG LNQAVAITSM CLQEEPTARP LISDVMVALS FLSMSTEDGI PATVPMESFR DKSMSIALSR HGSCSVTPFC ISRKDVGNKS
401: SSSSDSEDEE EEKEQKAEKE EESTSKKRQE QEETATDSDD ESDSNSEKDQ EEEQSQLEKA RESSSSSSDS GSERRSIDET NATAQSLKIS YSNYSSEEED
501: NEKLSSKSSC KSNEESTFSR YDSGRDHDDS SRNTSMRINS LAHDDKEEDE EENHETRSYS DHDDSPRNTS MRINSLSHDD DEEEEEENHQ TRLEHIHSSK
601: SEDQSVYSDD DAGESGESSL HRIEAKEEEH ISSDHD

Arabidopsis Description

LIP1Receptor-like kinase LIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.