Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006358.1-P Field mustard cytosol 100.0 100.0
CDX70697 Canola cytosol 97.4 95.9
CDY55581 Canola cytosol 74.31 73.04
CDX69447 Canola cytosol 75.0 72.85
AT5G16500.1 Thale cress cytosol 78.65 71.23
CDY28710 Canola cytosol 60.42 62.93
CDY51533 Canola cytosol 59.9 62.61
CDX74234 Canola cytosol 60.94 61.8
CDX92014 Canola cytosol 60.42 61.16
CDY03295 Canola cytosol 36.28 55.29
CDY39784 Canola cytosol, plastid 36.11 55.03
GSMUA_Achr5P29320_001 Banana cytosol 34.2 53.97
CDY65598 Canola cytosol 36.28 53.59
GSMUA_Achr5P14180_001 Banana cytosol, mitochondrion, plastid 31.94 53.33
GSMUA_Achr8P02730_001 Banana cytosol 33.85 52.28
CDY57665 Canola cytosol 26.04 52.26
GSMUA_Achr6P15570_001 Banana cytosol 34.38 51.83
CDY47330 Canola cytosol 33.33 50.39
CDY04867 Canola plastid 32.81 50.27
CDY55687 Canola plastid 32.64 50.13
CDY01117 Canola cytosol 33.16 50.13
CDY05311 Canola cytosol 37.33 48.75
CDX82241 Canola cytosol 31.42 48.66
CDY29433 Canola mitochondrion 31.25 48.52
CDY36035 Canola cytosol 31.25 48.39
VIT_04s0043g01030.t01 Wine grape cytosol, plastid 38.72 48.27
GSMUA_Achr10P... Banana cytosol, plastid 35.59 48.12
CDY66752 Canola cytosol 36.28 48.05
CDX93611 Canola cytosol 33.16 47.87
CDY19633 Canola cytosol, mitochondrion 30.56 47.7
CDY08017 Canola cytosol 36.46 47.51
CDX74065 Canola cytosol 36.46 47.51
CDX96628 Canola cytosol 31.08 47.48
CDY33638 Canola cytosol 31.08 47.35
CDY34917 Canola cytosol 36.28 47.18
CDY29515 Canola cytosol 30.56 46.19
CDY31493 Canola cytosol 30.03 46.01
TraesCS3D01G543300.1 Wheat cytosol 31.77 45.98
CDX88927 Canola cytosol 35.42 45.95
CDX85669 Canola cytosol 34.38 45.83
CDX91145 Canola cytosol 34.38 45.73
CDX95117 Canola cytosol 33.33 45.28
GSMUA_Achr4P18960_001 Banana plasma membrane, plastid 34.03 45.27
CDY06282 Canola cytosol 33.16 45.26
CDY43074 Canola mitochondrion 28.47 45.18
CDY55594 Canola plastid 28.47 45.05
CDY47164 Canola cytosol, plastid 30.73 45.04
HORVU3Hr1G117850.1 Barley cytosol 31.25 45.0
CDY32811 Canola cytosol 32.81 44.89
TraesCS3A01G537900.1 Wheat cytosol 31.94 44.88
CDY24861 Canola cytosol, plastid 30.21 44.85
TraesCS3B01G603300.1 Wheat cytosol, plastid 31.94 44.77
CDX68101 Canola cytosol 29.51 44.62
CDY25327 Canola cytosol, plastid 30.38 44.53
CDX85945 Canola cytosol 29.34 44.36
CDY22717 Canola cytosol 33.68 43.89
EES17638 Sorghum peroxisome, plastid 34.03 43.85
CDX78510 Canola cytosol 33.51 43.57
CDX69664 Canola cytosol 34.38 43.52
CDX97232 Canola cytosol 34.38 43.52
Os05t0125400-00 Rice cytosol 33.16 43.41
KRH68843 Soybean cytosol 43.4 43.1
CDX88266 Canola cytosol, nucleus, plastid 28.65 43.08
CDX70830 Canola cytosol 34.9 42.95
HORVU1Hr1G013840.1 Barley mitochondrion 33.16 42.92
CDX87608 Canola cytosol 28.47 42.82
CDY07261 Canola cytosol, plastid 18.92 42.41
CDX92596 Canola plastid 34.72 42.28
TraesCS1D01G067700.1 Wheat plastid 32.81 42.19
KRG97093 Soybean cytosol 43.4 42.09
TraesCS1B01G085000.1 Wheat plastid 32.64 42.06
TraesCS1A01G066700.1 Wheat peroxisome, plastid 32.47 41.74
CDY13906 Canola plastid 35.07 41.74
Solyc05g055860.2.1 Tomato cytosol 34.9 41.36
CDX83297 Canola cytosol 30.38 40.6
CDX95766 Canola cytosol 30.21 40.47
PGSC0003DMT400031291 Potato cytosol 39.06 40.18
PGSC0003DMT400060019 Potato cytosol 34.9 40.12
Solyc04g050970.2.1 Tomato plastid 39.06 40.11
CDY53627 Canola cytosol 33.85 39.63
Zm00001d041938_P001 Maize plastid 32.29 38.99
KRG92591 Soybean cytosol 40.28 37.48
KRH34195 Soybean cytosol 39.76 36.41
CDY58830 Canola nucleus 32.99 34.05
CDY07262 Canola cytosol 2.78 27.12
CDY24650 Canola mitochondrion 37.33 18.02
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078CRL8EnsemblPlants:CDX78694ProteinID:CDX78694
ProteinID:CDX78694.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00130121001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF48
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000253F601
SEG:seg:::::
Description
BnaA03g06060D
Coordinates
chrLK031815:-:1844447..1846638
Molecular Weight (calculated)
63674.5 Da
IEP (calculated)
4.277
GRAVY (calculated)
-0.872
Length
576 amino acids
Sequence
(BLAST)
001: MMNCFPCFTS QKSSNPPSGN ETNENNEQEV RPPPVAAVKH IEERETEQPP VKTFNFRELA TATKNFRQEC LLGEGGSGRV YKGTLQSTGQ LVAVKQLDKH
101: GLHGTKEFQA EVLSLSKLEH PNLVKLIGYC ADGDQRLLVF EFVSGGSLPD HLFEQEPGQK PIDWLTRMKI AFGAAQGLDY LHDKVNPPVI YRDLKAANIL
201: LDDEFYPKLC DYGLNNLAPG AGDSMFHSSC VMDTYGYSAP EYTRGEDLTV KSDVYSFGVV LLELITGRRA VDTTKPNDEQ NLVAWAQPIF RDPKRYPDMA
301: DPLLKKNFSE RGINQAVAIT SMCLQEEPTA RPLISDVMVA LNFLSMSTEE GIPDKVPILS FRDKSMSIAL SRHGSCSVTP FSLLQKEGDD DSSSASSESE
401: DDDDEKKEES KGSKKKQEED SGDESGSDDE KGQEEVEKPG SSKSSSSDSG SERASPIDES NATAQSLEIK YSYSSEEEEG DNERLSSSKS DKDCTSFRYD
501: SERNHDDSPK NTSIAHDDHS DDEEEEDHET RLEHIQSSKS EAHSVYSDDD AGEESGESSL NRAEPEEGDH GSSDEE
Best Arabidopsis Sequence Match ( AT5G16500.1 )
(BLAST)
001: MIIMMNCFPC FTSQKSRNAP CTTNETNDDN VEHDEFRPPV VATTKRTEER EPAEQQPPVK TFNFRELATA TKNFRQECLL GEGGFGRVYK GTLQSTGQLV
101: AVKQLDKHGL HGNKEFLAEV LSLAKLEHPN LVKLIGYCAD GDQRLLVFEY VSGGSLQDHL YEQKPGQKPM DWITRMKIAF GAAQGLDYLH DKVTPAVIYR
201: DLKASNILLD AEFYPKLCDF GLHNLEPGTG DSLFLSSRVM DTYGYSAPEY TRGDDLTVKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFKD
301: PKRYPDMADP LLRKNFSERG LNQAVAITSM CLQEEPTARP LISDVMVALS FLSMSTEDGI PATVPMESFR DKSMSIALSR HGSCSVTPFC ISRKDVGNKS
401: SSSSDSEDEE EEKEQKAEKE EESTSKKRQE QEETATDSDD ESDSNSEKDQ EEEQSQLEKA RESSSSSSDS GSERRSIDET NATAQSLKIS YSNYSSEEED
501: NEKLSSKSSC KSNEESTFSR YDSGRDHDDS SRNTSMRINS LAHDDKEEDE EENHETRSYS DHDDSPRNTS MRINSLSHDD DEEEEEENHQ TRLEHIHSSK
601: SEDQSVYSDD DAGESGESSL HRIEAKEEEH ISSDHD
Arabidopsis Description
LIP1Receptor-like kinase LIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.