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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69664 plasma membrane
CDX72769
CDX78510 plasma membrane
CDX85669 plasma membrane
CDX91145 plasma membrane
CDX96295
CDX97232 plasma membrane
CDY53627 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13160.1 CDX72769 AT1G71020.1 21798944
AT5G13160.1 CDX96295 AT1G71020.1 21798944
AT5G13160.1 CDX69664 AT5G13160.1 24225654
AT5G13160.1 CDX78510 AT5G13160.1 24225654
AT5G13160.1 CDX85669 AT5G13160.1 24225654
AT5G13160.1 CDX91145 AT5G13160.1 24225654
AT5G13160.1 CDX97232 AT5G13160.1 24225654
AT5G13160.1 CDY53627 AT5G13160.1 24225654
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006184.1-P Field mustard cytosol 98.65 98.87
CDX85669 Canola cytosol 84.42 86.57
CDX91145 Canola cytosol 84.42 86.37
AT5G13160.1 Thale cress cytosol 88.49 85.96
CDX69664 Canola cytosol 87.58 85.27
CDX97232 Canola cytosol 87.36 85.05
CDY53627 Canola cytosol 91.2 82.11
KRH36361 Soybean cytosol 76.07 73.26
GSMUA_Achr5P25020_001 Banana cytosol 70.2 73.0
Solyc05g024290.2.1 Tomato cytosol 76.52 72.9
KRH46858 Soybean cytosol 76.52 72.28
KRG93133 Soybean cytosol 75.85 72.1
PGSC0003DMT400021929 Potato cytosol 76.07 72.01
VIT_01s0146g00250.t01 Wine grape cytosol 75.39 71.98
GSMUA_Achr9P01200_001 Banana cytosol 45.15 70.42
CDY57665 Canola cytosol 43.57 67.25
GSMUA_Achr9P29230_001 Banana cytosol 63.66 65.13
CDX88927 Canola cytosol 65.01 64.86
Os04t0393900-01 Rice plasma membrane 65.01 63.44
CDY04867 Canola plastid 53.72 63.3
CDY55687 Canola plastid 53.05 62.67
TraesCS2B01G302800.1 Wheat cytosol, plastid 66.59 62.37
EES10653 Sorghum cytosol 67.49 61.78
TraesCS2D01G284200.1 Wheat cytosol 66.37 61.76
HORVU2Hr1G070690.2 Barley cytosol 66.59 61.59
GSMUA_Achr6P20850_001 Banana cytosol 64.33 61.42
TraesCS2A01G285700.1 Wheat cytosol, plastid 65.91 61.34
Zm00001d003925_P001 Maize cytosol, nucleus, plastid 67.27 61.32
CDX70830 Canola cytosol 64.56 61.11
CDX92596 Canola plastid 65.24 61.1
CDY19633 Canola cytosol, mitochondrion 50.11 60.16
CDY03295 Canola cytosol 51.24 60.05
CDY13906 Canola plastid 65.46 59.92
CDY29433 Canola mitochondrion 50.11 59.84
EES05138 Sorghum cytosol 69.07 59.77
Zm00001d016591_P002 Maize cytosol 68.62 59.73
CDX82241 Canola cytosol 50.11 59.68
CDY39784 Canola cytosol, plastid 50.79 59.52
CDY36035 Canola cytosol 49.89 59.41
Zm00001d050575_P001 Maize cytosol 69.3 59.27
Os02t0513000-01 Rice plasma membrane 69.07 58.17
CDX93611 Canola cytosol 51.92 57.64
CDY55594 Canola plastid 46.5 56.59
CDY43074 Canola mitochondrion 46.28 56.47
CDX96628 Canola cytosol 47.18 55.44
CDY33638 Canola cytosol 47.18 55.29
CDY32811 Canola cytosol 52.14 54.87
CDY06282 Canola cytosol 52.14 54.74
CDX95117 Canola cytosol 52.37 54.72
CDY47164 Canola cytosol, plastid 48.53 54.71
CDY25327 Canola cytosol, plastid 48.53 54.71
CDY24861 Canola cytosol, plastid 47.86 54.64
CDY65598 Canola cytosol 47.86 54.36
CDY31493 Canola cytosol 45.82 53.99
CDY47330 Canola cytosol 45.82 53.28
CDY29515 Canola cytosol 45.82 53.28
CDY01117 Canola cytosol 45.82 53.28
CDX88266 Canola cytosol, nucleus, plastid 45.82 53.0
CDX87608 Canola cytosol 45.37 52.48
CDY66752 Canola cytosol 51.24 52.18
CDY07261 Canola cytosol, plastid 30.02 51.75
CDX74065 Canola cytosol 51.47 51.58
CDY08017 Canola cytosol 51.47 51.58
CDY05311 Canola cytosol 51.24 51.47
CDY22717 Canola cytosol 51.24 51.36
CDX83297 Canola cytosol 49.66 51.04
CDY34917 Canola cytosol 51.02 51.02
CDX68101 Canola cytosol 43.79 50.92
CDX85945 Canola cytosol 43.57 50.66
CDX95766 Canola cytosol 48.53 50.0
CDY58830 Canola nucleus 52.37 41.58
CDY51533 Canola cytosol 46.95 37.75
CDY28710 Canola cytosol 46.28 37.07
CDX74234 Canola cytosol 46.05 35.92
CDX92014 Canola cytosol 46.05 35.85
CDY07262 Canola cytosol 4.51 33.9
CDX78694 Canola cytosol 43.57 33.51
CDX70697 Canola cytosol 43.79 33.16
CDY55581 Canola cytosol 43.57 32.94
CDX69447 Canola cytosol 43.79 32.72
CDY24650 Canola mitochondrion 51.47 19.11
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1MapMan:26.8.1.2.3Gene3D:3.30.200.20GO:A0A078CNU7EnsemblPlants:CDX78510
ProteinID:CDX78510ProteinID:CDX78510.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00129910001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF491InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF0A18SEG:seg::::
Description
BnaA03g04220D
Coordinates
chrLK031815:+:1058666..1060971
Molecular Weight (calculated)
49147.4 Da
IEP (calculated)
7.096
GRAVY (calculated)
-0.494
Length
443 amino acids
Sequence
(BLAST)
001: MGCFSCFNSS EDEKLNPVEE SSKPQKQSQT IVSNNFSTLP SGGEKKLSSK SNVRSKRELL LPRDGFEQIA AHTFAFHELV AATMDFHPDT FLGEGGFGCV
101: YKGRLETTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LAEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPMFN DRRRFIKLAD PKLKGRFPTR ALYQALSVAS MCIQEEAATR PPIADVVTAI SYLANQAYDP NKNDRGGRND EGGGKFDLAG SEKEDSPRET
401: ARILNRDIDR KRAVAEVKMW GESSREKRRQ SEKGTSESNS TTG
Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)
001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG
Arabidopsis Description
PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.