Factsheet for GSMUA_Achr5P25020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P25020_001	plasma membrane
GSMUA_Achr6P20850_001	plasma membrane
GSMUA_Achr9P01200_001	plasma membrane
GSMUA_Achr9P15600_001
GSMUA_Achr9P29230_001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	GSMUA_Achr9P15600_001	AT1G71020.1	21798944
AT5G13160.1	GSMUA_Achr5P25020_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr6P20850_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P01200_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P29230_001	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01200_001	Banana	cytosol	49.06	73.59
VIT_01s0146g00250.t01	Wine grape	cytosol	79.81	73.28
CDX85669	Canola	cytosol	72.77	71.76
CDX91145	Canola	cytosol	72.77	71.59
Bra006184.1-P	Field mustard	cytosol	73.47	70.81
Solyc05g024290.2.1	Tomato	cytosol	77.23	70.75
AT5G13160.1	Thale cress	cytosol	75.59	70.61
GSMUA_Achr9P29230_001	Banana	cytosol	71.6	70.44
CDX78510	Canola	cytosol	73.0	70.2
CDX69664	Canola	cytosol	74.88	70.11
CDX97232	Canola	cytosol	74.88	70.11
Bra008851.1-P	Field mustard	cytosol	74.88	70.11
KRH36361	Soybean	cytosol	75.59	70.0
Bra023393.1-P	Field mustard	cytosol	73.71	69.62
PGSC0003DMT400021929	Potato	cytosol	76.06	69.23
KRH46858	Soybean	cytosol	76.06	69.08
KRG93133	Soybean	cytosol	75.12	68.67
GSMUA_Achr8P00160_001	Banana	cytosol	67.14	68.42
GSMUA_Achr6P15480_001	Banana	cytosol	61.5	67.88
Os04t0393900-01	Rice	plasma membrane	71.6	67.18
GSMUA_Achr10P...	Banana	cytosol	60.33	66.41
GSMUA_Achr3P08930_001	Banana	cytosol	66.67	66.2
GSMUA_Achr6P20850_001	Banana	cytosol	71.6	65.73
EES10653	Sorghum	cytosol	73.71	64.88
GSMUA_Achr10P...	Banana	cytosol	64.79	64.79
TraesCS2B01G302800.1	Wheat	cytosol, plastid	71.83	64.69
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	73.71	64.61
TraesCS2D01G284200.1	Wheat	cytosol	71.83	64.29
CDY53627	Canola	cytosol	74.18	64.23
TraesCS2A01G285700.1	Wheat	cytosol, plastid	71.6	64.08
HORVU2Hr1G070690.2	Barley	cytosol	71.83	63.88
GSMUA_Achr9P17690_001	Banana	cytosol, nucleus, plastid	41.55	63.21
GSMUA_Achr2P06850_001	Banana	cytosol	65.49	62.98
GSMUA_Achr5P29320_001	Banana	cytosol	53.29	62.19
EES05138	Sorghum	cytosol	74.18	61.72
Zm00001d016591_P002	Maize	cytosol	73.47	61.49
Zm00001d050575_P001	Maize	cytosol	74.41	61.2
GSMUA_Achr4P25510_001	Banana	cytosol	37.09	61.0
GSMUA_Achr8P21930_001	Banana	cytosol, nucleus, plastid	67.37	60.93
Os02t0513000-01	Rice	plasma membrane	74.65	60.46
GSMUA_AchrUn_...	Banana	cytosol	49.77	59.22
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	46.95	57.97
GSMUA_Achr10P...	Banana	cytosol, plastid	57.51	57.51
GSMUA_Achr8P02730_001	Banana	cytosol	50.23	57.37
GSMUA_Achr6P15570_001	Banana	cytosol	51.41	57.33
GSMUA_Achr1P02780_001	Banana	cytosol	49.53	55.97
GSMUA_Achr11P...	Banana	cytosol	54.93	55.45
GSMUA_Achr10P...	Banana	cytosol	59.15	55.38
GSMUA_Achr9P23970_001	Banana	cytosol	48.83	55.32
GSMUA_Achr3P23170_001	Banana	cytosol	52.82	55.15
GSMUA_AchrUn_...	Banana	plasma membrane	59.86	53.91
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	53.29	52.42
GSMUA_Achr9P24960_001	Banana	cytosol	54.23	50.55
GSMUA_Achr8P03680_001	Banana	cytosol	50.7	43.2
GSMUA_Achr11P...	Banana	plastid	39.44	39.34
GSMUA_Achr5P26460_001	Banana	cytosol	53.99	29.26
GSMUA_Achr11P...	Banana	nucleus	50.94	15.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G25020_001	EnsemblPlants:GSMUA_Achr5P25020_001	EnsemblPlants:GSMUA_Achr5T25020_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0T1H7	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295FECA	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25020_001]

Coordinates

chr5:-:26184318..26191036

Molecular Weight (calculated)

47049.8 Da

IEP (calculated)

8.142

GRAVY (calculated)

-0.484

Length

426 amino acids

Sequence
(BLAST)

001: MGCFPCFESR RGGVLNPGNG RDDSREEHPM VPPHIDRSSS VADSVNHRSN SGSKREAQSE KDVSSVNISA HTFTFRELAT ATRNFRDECF LGEGGFGRVY
101: KGRLESTGQI VAVKQLDREG LQGNREFLVE VLMLSLLHHP NLVNLIGYCA DGDQRLLVYE FLPLGSLEDH LHDLPPDKEP LDWNTRMKIA AGAAKGLEYL
201: HDKASPPVIY RDFKSSNILL GEGFHPKLSD FGLAKLGPTG DKSHVSTRVM GTYGYCAPEY AMTGQLTVKS DVYSFGVVLL ELITGRKAID SALPHGEQNL
301: ISWARPMFND RKKLPKLADP RLQGRFPMRG LYQALAVASM CIQEQAASRP GIADVVTALS YLANKAYDPN ASPASRSEKE DSPREMAGIF KKDFDRERAV
401: AEAKMWGENW RGKTRASSRN ASSANS

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.