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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69664 plasma membrane
CDX72769
CDX78510 plasma membrane
CDX85669 plasma membrane
CDX91145 plasma membrane
CDX96295
CDX97232 plasma membrane
CDY53627 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13160.1 CDX72769 AT1G71020.1 21798944
AT5G13160.1 CDX96295 AT1G71020.1 21798944
AT5G13160.1 CDX69664 AT5G13160.1 24225654
AT5G13160.1 CDX78510 AT5G13160.1 24225654
AT5G13160.1 CDX85669 AT5G13160.1 24225654
AT5G13160.1 CDX91145 AT5G13160.1 24225654
AT5G13160.1 CDX97232 AT5G13160.1 24225654
AT5G13160.1 CDY53627 AT5G13160.1 24225654
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91145 Canola cytosol 99.31 99.08
Bra023393.1-P Field mustard cytosol 99.77 95.57
AT5G13160.1 Thale cress cytosol 93.98 89.04
CDX69664 Canola cytosol 93.29 88.57
CDX97232 Canola cytosol 93.29 88.57
CDX78510 Canola cytosol 86.57 84.42
CDY53627 Canola cytosol 85.65 75.2
KRH36361 Soybean cytosol 79.17 74.35
Solyc05g024290.2.1 Tomato cytosol 78.94 73.33
VIT_01s0146g00250.t01 Wine grape cytosol 78.47 73.06
GSMUA_Achr5P25020_001 Banana cytosol 71.76 72.77
KRH46858 Soybean cytosol 78.7 72.49
KRG93133 Soybean cytosol 78.01 72.32
PGSC0003DMT400021929 Potato cytosol 78.24 72.22
GSMUA_Achr9P01200_001 Banana cytosol 46.06 70.07
CDY57665 Canola cytosol 45.6 68.64
CDX88927 Canola cytosol 68.52 66.67
GSMUA_Achr9P29230_001 Banana cytosol 65.51 65.36
CDY04867 Canola plastid 56.48 64.89
Os04t0393900-01 Rice plasma membrane 68.06 64.76
TraesCS2B01G302800.1 Wheat cytosol, plastid 70.37 64.27
CDY55687 Canola plastid 55.79 64.27
TraesCS2D01G284200.1 Wheat cytosol 70.37 63.87
EES10653 Sorghum cytosol 71.53 63.84
HORVU2Hr1G070690.2 Barley cytosol 70.6 63.67
TraesCS2A01G285700.1 Wheat cytosol, plastid 70.14 63.66
Zm00001d003925_P001 Maize cytosol, nucleus, plastid 71.53 63.58
CDX70830 Canola cytosol 67.82 62.61
CDX92596 Canola plastid 67.82 61.95
GSMUA_Achr6P20850_001 Banana cytosol 66.44 61.85
CDX82241 Canola cytosol 53.01 61.56
Zm00001d016591_P002 Maize cytosol 72.22 61.3
CDY36035 Canola cytosol 52.78 61.29
EES05138 Sorghum cytosol 72.45 61.13
CDY03295 Canola cytosol 53.47 61.11
CDY39784 Canola cytosol, plastid 53.47 61.11
Zm00001d050575_P001 Maize cytosol 72.92 60.81
CDY13906 Canola plastid 68.06 60.74
CDY19633 Canola cytosol, mitochondrion 51.85 60.7
CDY29433 Canola mitochondrion 51.85 60.38
Os02t0513000-01 Rice plasma membrane 72.69 59.7
CDY55594 Canola plastid 49.07 58.24
CDY43074 Canola mitochondrion 48.84 58.13
CDX96628 Canola cytosol 50.23 57.56
CDY33638 Canola cytosol 50.23 57.41
CDY65598 Canola cytosol 51.16 56.67
CDX93611 Canola cytosol 52.08 56.39
CDY31493 Canola cytosol 48.84 56.12
CDY24861 Canola cytosol, plastid 50.0 55.67
CDY29515 Canola cytosol 49.07 55.64
CDY25327 Canola cytosol, plastid 50.46 55.47
CDY47164 Canola cytosol, plastid 50.46 55.47
CDY47330 Canola cytosol 47.92 54.33
CDY01117 Canola cytosol 47.92 54.33
CDY06282 Canola cytosol 53.01 54.27
CDY66752 Canola cytosol 54.4 54.02
CDX95117 Canola cytosol 52.55 53.54
CDX88266 Canola cytosol, nucleus, plastid 47.45 53.52
CDY05311 Canola cytosol 54.4 53.29
CDY32811 Canola cytosol 51.85 53.21
CDX87608 Canola cytosol 46.99 53.0
CDY07261 Canola cytosol, plastid 31.48 52.92
CDY34917 Canola cytosol 54.17 52.82
CDY08017 Canola cytosol 53.94 52.71
CDX74065 Canola cytosol 53.94 52.71
CDX68101 Canola cytosol 45.83 51.97
CDX85945 Canola cytosol 45.83 51.97
CDY22717 Canola cytosol 52.08 50.91
CDX83297 Canola cytosol 50.23 50.35
CDX95766 Canola cytosol 49.77 50.0
CDY58830 Canola nucleus 51.39 39.78
CDY51533 Canola cytosol 49.31 38.66
CDY28710 Canola cytosol 48.84 38.16
CDX74234 Canola cytosol 47.69 36.27
CDX92014 Canola cytosol 47.69 36.2
CDX78694 Canola cytosol 45.83 34.38
CDY55581 Canola cytosol 46.06 33.96
CDX69447 Canola cytosol 46.53 33.9
CDX70697 Canola cytosol 45.83 33.85
CDY07262 Canola cytosol 3.94 28.81
CDY24650 Canola mitochondrion 54.63 19.78
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1MapMan:26.8.1.2.3Gene3D:3.30.200.20GO:A0A078DBH9EnsemblPlants:CDX85669
ProteinID:CDX85669ProteinID:CDX85669.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00143406001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF491InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF0B2E:::::
Description
BnaA02g01440D
Coordinates
chrLK031842:-:1123744..1126324
Molecular Weight (calculated)
47305.1 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.416
Length
432 amino acids
Sequence
(BLAST)
001: MGCFSCFDSS DDETLNPAAE ESSKTQKQSQ PTVSNTLSAL PSGGEKLNSN SKSNGGAKTE LLLPRDGLGQ IAAHTFTFRE LAAATMNFHP DTFLGEGGFG
101: RVYKGRLDST GQVVAVKQLD RNGLQGNREF LVEVLMLSLL HHPNLVNLIG YCADGDQRLL VYEFMSLGSL EDHLHDLPPD KEALDWNMRM KIAAGAAKGL
201: EFLHDKANPP VIYRDFKSSN ILLDEGFHPK LSDFGLAKLG PTGDKSHVST RVMGTYGYCA PEYAMTGQLT VKSDVYSFGV VFLELITGRK AIDTDMPHGE
301: QNLVAWARPL FNDRRKFIKL ADPKLKGRFP TRALYQALAV ASMCIQGEAA TRPLIADVVT ALSYLANQGG GSGSKFDLEG SEKEDSPRET ARMLNRDINR
401: ERAVAEAKMW GESLREKRRQ SEQGTSESNS TG
Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)
001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG
Arabidopsis Description
PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.