Factsheet for Solyc05g024290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g007640.2.1
Solyc05g008230.2.1
Solyc05g024290.2.1	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	Solyc04g007640.2.1	AT1G71020.1	21798944
AT5G13160.1	Solyc05g008230.2.1	AT1G71020.1	21798944
AT5G13160.1	Solyc05g024290.2.1	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021929	Potato	cytosol	96.99	96.37
VIT_01s0146g00250.t01	Wine grape	cytosol	82.8	82.97
KRH36361	Soybean	cytosol	79.14	80.0
KRG93133	Soybean	cytosol	79.14	78.97
CDX85669	Canola	cytosol	73.33	78.94
KRH46858	Soybean	cytosol	79.57	78.89
CDX91145	Canola	cytosol	73.33	78.75
AT5G13160.1	Thale cress	cytosol	77.2	78.73
Bra008851.1-P	Field mustard	cytosol	75.91	77.58
CDX69664	Canola	cytosol	75.91	77.58
CDX97232	Canola	cytosol	75.91	77.58
GSMUA_Achr5P25020_001	Banana	cytosol	70.75	77.23
Bra023393.1-P	Field mustard	cytosol	74.84	77.16
Bra006184.1-P	Field mustard	cytosol	72.9	76.7
CDX78510	Canola	cytosol	72.9	76.52
GSMUA_Achr9P01200_001	Banana	cytosol	44.3	72.54
Solyc10g085990.1.1	Tomato	plastid	55.7	69.81
GSMUA_Achr9P29230_001	Banana	cytosol	63.87	68.59
CDY53627	Canola	cytosol	72.47	68.5
Os04t0393900-01	Rice	plasma membrane	66.02	67.62
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	56.13	66.75
TraesCS2B01G302800.1	Wheat	cytosol, plastid	67.1	65.96
TraesCS2D01G284200.1	Wheat	cytosol	67.1	65.55
EES10653	Sorghum	cytosol	68.17	65.5
TraesCS2A01G285700.1	Wheat	cytosol, plastid	66.88	65.34
GSMUA_Achr6P20850_001	Banana	cytosol	65.16	65.3
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	68.17	65.23
Solyc01g067400.2.1	Tomato	cytosol	71.61	65.17
HORVU2Hr1G070690.2	Barley	cytosol	67.1	65.14
EES05138	Sorghum	cytosol	70.32	63.87
Zm00001d016591_P002	Maize	cytosol	69.46	63.46
Zm00001d050575_P001	Maize	cytosol	69.89	62.74
Os02t0513000-01	Rice	plasma membrane	70.54	62.36
Solyc04g082510.2.1	Tomato	plastid	47.31	59.46
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	48.6	58.1
Solyc10g006340.2.1	Tomato	cytosol	50.54	57.88
Solyc12g094680.1.1	Tomato	cytosol	48.6	56.5
Solyc12g005160.1.1	Tomato	cytosol	47.74	55.09
Solyc06g083500.2.1	Tomato	nucleus	51.61	55.05
Solyc09g061330.1.1	Tomato	plastid	52.04	54.26
Solyc06g075550.2.1	Tomato	cytosol, nucleus	47.96	54.26
Solyc07g064340.2.1	Tomato	plasma membrane	47.96	53.86
Solyc02g094380.1.1	Tomato	cytosol	45.59	49.77
Solyc11g072660.1.1	Tomato	cytosol	50.54	48.96
Solyc05g055860.2.1	Tomato	cytosol	45.38	43.42
Solyc04g050970.2.1	Tomato	plastid	47.96	39.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0002221
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009816	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	GO:GO:0042742
GO:GO:0045087	GO:GO:0046777	InterPro:IPR000719	UniProt:K4BZR6	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc05g024290.2	EnsemblPlants:Solyc05g024290.2.1
UniParc:UPI0002765AD7	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:Projected from Arabidopsis thaliana (AT5G13160) UniProtKB/Swiss-Prot;Acc:Q9FE20]

Coordinates

chr5:-:31012552..31022465

Molecular Weight (calculated)

51642.0 Da

IEP (calculated)

7.592

GRAVY (calculated)

-0.628

Length

465 amino acids

Sequence
(BLAST)

001: MGCFSCFDSK EDEKLNPQKD RDDSDRKQPP PSNISRLSSG ADRLKIRSSN GSKREFLGLK DAPDVQIAAH TFTFRELAAA TNNFRPESFI GEGGFGRVYK
101: GQLPSGQVVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEFM PLGSLEDHLH DLPPDKEPLD WNTRMKIASG AAKGLEHLHD
201: KANPPVIYRD FKSSNILLKE NFFPKLSDFG LAKLGPTGDK SHVSTRVMGT YGYCAPEYAM TGQLTVKSDV YSFGVVFLEL ITGRKAIDST KPQGEQNLVA
301: WARPLFNDRR KFAKLADPSL QGQFPMRGLY QALAVASMCI QEQAAGRPLI GDVVTALSYL ANQSYDPGTV PGQIHRFGAD SVDRRNKDDR VGRILRSEDG
401: EGGGSGRKWD VDGGSEKEDS PRETARMLNR DLDRERAVAE AKMWGENWRD KRRQNGQGSF DGGNE

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.