Factsheet for Zm00001d050575_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000381_P001
Zm00001d003925_P001	plasma membrane
Zm00001d016591_P002	plasma membrane
Zm00001d050575_P001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	Zm00001d000381_P001	AT1G71020.1	21798944
AT5G13160.1	Zm00001d003925_P001	AT5G13160.1	24225654
AT5G13160.1	Zm00001d016591_P002	AT5G13160.1	24225654
AT5G13160.1	Zm00001d050575_P001	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05138	Sorghum	cytosol	95.17	96.29
Zm00001d016591_P002	Maize	cytosol	92.28	93.91
Os02t0513000-01	Rice	plasma membrane	90.35	88.97
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	71.43	76.13
GSMUA_Achr5P25020_001	Banana	cytosol	61.2	74.41
CDX85669	Canola	cytosol	60.81	72.92
CDX91145	Canola	cytosol	60.81	72.75
VIT_01s0146g00250.t01	Wine grape	cytosol	64.86	72.41
Bra023393.1-P	Field mustard	cytosol	62.55	71.84
KRH36361	Soybean	cytosol	63.51	71.52
Bra008851.1-P	Field mustard	cytosol	62.55	71.21
CDX69664	Canola	cytosol	62.55	71.21
CDX97232	Canola	cytosol	62.55	71.21
AT5G13160.1	Thale cress	cytosol	62.36	70.83
KRG93133	Soybean	cytosol	63.13	70.17
KRH46858	Soybean	cytosol	63.51	70.15
Solyc05g024290.2.1	Tomato	cytosol	62.74	69.89
Bra006184.1-P	Field mustard	cytosol	59.27	69.46
CDX78510	Canola	cytosol	59.27	69.3
PGSC0003DMT400021929	Potato	cytosol	62.16	68.8
CDY53627	Canola	cytosol	60.04	63.21
Zm00001d010492_P010	Maize	cytosol	56.37	61.6
Zm00001d011908_P001	Maize	cytosol, nucleus, plastid	58.11	60.56
Zm00001d042185_P003	Maize	cytosol	58.49	60.48
Zm00001d022492_P002	Maize	plastid	53.47	59.83
Zm00001d027508_P002	Maize	cytosol	38.61	53.19
Zm00001d016176_P001	Maize	cytosol	40.35	52.78
Zm00001d040303_P001	Maize	plasma membrane	47.1	52.7
Zm00001d048341_P001	Maize	cytosol	37.84	52.41
Zm00001d043227_P002	Maize	mitochondrion	43.05	51.03
Zm00001d028701_P001	Maize	cytosol	36.1	47.1
Zm00001d038394_P002	Maize	cytosol	38.03	46.24
Zm00001d012600_P001	Maize	plastid	42.47	45.55
Zm00001d010687_P004	Maize	mitochondrion, plastid	43.82	44.86
Zm00001d041938_P001	Maize	plastid	40.15	43.61
Zm00001d010548_P001	Maize	mitochondrion	37.84	42.33
Zm00001d019727_P001	Maize	plastid	41.12	36.04

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100283091	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	ProteinID:AQK52717.1
ProteinID:AQK52719.1	UniProt:B6TEK0	EMBL:BT063797	ncoils:Coil	EMBL:EU963415	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF287	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000182BF1A	EnsemblPlantsGene:Zm00001d050575	EnsemblPlants:Zm00001d050575_P001
EnsemblPlants:Zm00001d050575_T001	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PBS1

Coordinates

chr4:+:101589397..101597225

Molecular Weight (calculated)

56644.2 Da

IEP (calculated)

8.330

GRAVY (calculated)

-0.510

Length

518 amino acids

Sequence
(BLAST)

001: MGCFPCFDSP ADEQLNPKFG GAGGYGGTSS AVAAYGNGTG AGVSIGRHGD RGYPDLQQAP MAAPRVEKLS AAAEKARVKS NGLTKEALVP KDANGNAISA
101: QTFTFRELAT ATRNFRPECF LGEGGFGRVY KGRLESTGQV VAIKQLNRDG LQGNREFLVE VLMLSLLHHQ NLVNLIGYCA DGDQRLLVYE YMPSGSLEDH
201: LHDLPLDKEA LDWNTRMKIA AGAAKGLEYL HDKANPPVIY RDFKSSNILL DESFHPKLSD FGLAKLGPVG DKSHVSTRVM GTYGYCAPEY AMTGQLTVKS
301: DVYSFGVVLL ELITGRRAID STRPHGEQNL VSWARPLFND RRKLPKMADP RLEGRYPMRG LYQALAVASM CIQSEAASRP LIADVVTALS YLASQPYDPN
401: AALASRKPGG DQRSKPGENG RAVSRNDETG SSGHKTPAKD REDSPRDLPA ILNKDLDRER MVAEAKMWGD RERMVAEAKM WGDRERMVAE AKMWGENWRD
501: KRRAEIGQGS LDSVTGNS

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.