Factsheet for Zm00001d019727_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96397	Sorghum	cytosol	64.64	89.67
Os09t0572600-01	Rice	mitochondrion	52.12	73.51
TraesCS4D01G000300.1	Wheat	cytosol	50.25	66.59
TraesCS4B01G000300.1	Wheat	cytosol	50.59	65.71
TraesCS4A01G000300.1	Wheat	cytosol	50.59	64.86
GSMUA_Achr3P23170_001	Banana	cytosol	41.79	60.54
HORVU4Hr1G000590.6	Barley	mitochondrion	43.82	54.64
Zm00001d043227_P002	Maize	mitochondrion	37.56	50.8
Zm00001d012600_P001	Maize	plastid	38.92	47.62
Zm00001d027508_P002	Maize	cytosol	30.12	47.34
Zm00001d048341_P001	Maize	cytosol	29.78	47.06
Zm00001d010492_P010	Maize	cytosol	37.39	46.62
Zm00001d010687_P004	Maize	mitochondrion, plastid	39.26	45.85
Zm00001d022492_P002	Maize	plastid	35.03	44.71
Zm00001d011908_P001	Maize	cytosol, nucleus, plastid	37.56	44.67
Zm00001d040303_P001	Maize	plasma membrane	34.86	44.49
Zm00001d042185_P003	Maize	cytosol	37.56	44.31
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	35.36	43.0
Zm00001d016591_P002	Maize	cytosol	36.04	41.85
Zm00001d028701_P001	Maize	cytosol	27.75	41.31
Zm00001d050575_P001	Maize	cytosol	36.04	41.12
Zm00001d041938_P001	Maize	plastid	32.32	40.04
Zm00001d016176_P001	Maize	cytosol	25.55	38.13
Zm00001d038394_P002	Maize	cytosol	27.41	38.03
Zm00001d010548_P001	Maize	mitochondrion	27.07	34.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6I055	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM53661.1	PFAM:PF07714	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF73	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000842385F	EnsemblPlantsGene:Zm00001d019727	EnsemblPlants:Zm00001d019727_P001	EnsemblPlants:Zm00001d019727_T001	SEG:seg

Description

Receptor-like kinase LIP2

Coordinates

chr7:-:54088916..54093098

Molecular Weight (calculated)

63824.6 Da

IEP (calculated)

6.871

GRAVY (calculated)

-0.288

Length

591 amino acids

Sequence
(BLAST)

001: MGGGGGDEKA HRDLSVASFS SLYRPSSLPV EFSFGSDSSE SRKRSLPRGV VSIGAISLAG GLVLSAVNDL AIFNGCTTKA IEHAADNPAV VEAIGVPIVR
101: GPWYDASLEV GHRRRSVSCT FPVSGPHGSG FLQIKATRDG EDGLLSFLRH HDWKILLLEA HLEAPSDDED QRKLVKSHTS DHAVASSPAT SSSSAPSSCR
201: NNDRRAPPER QAPGEEKSRR RNDSVDNSNL VDLVNDIVAE SVSYRHRRVA EDILKMEKAG KVTARAFTYA ELSEATGGFR PESLLGEGGF GPVYRGRLGS
301: SSGPEVAVKQ LDRNGMQGTR EFLVEALMLS LLKHSNLVTL LGFCTDADHR MLIYEYMPLG SLEDHLLDLP PGRAPLDWAT RMRVAQGAAR GLEYLHDTAR
401: PPVIYRDFKA SNILLDTGFR ARLSDFGLAK VGPVGDKSHV STRVMGTYGY CAPEYALTGK LTTMSDVYSF GVVFLEIITG SRAIDTTRPP EKHNLVLWAA
501: PRFKDKRRFA EMADPLLKGA YPTKGLYQAL AIAAMCLQED ATMRPAISDV VTALDYLTVA GGGAAANEPP APNPNQQQQQ TDIIGHAGEQ A

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.