CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0572600-01	Rice	mitochondrion	73.47	74.7
TraesCS4D01G000300.1	Wheat	cytosol	69.25	66.14
TraesCS4B01G000300.1	Wheat	cytosol	69.72	65.27
Zm00001d019727_P001	Maize	plastid	89.67	64.64
TraesCS4A01G000300.1	Wheat	cytosol	69.72	64.43
GSMUA_Achr3P23170_001	Banana	cytosol	57.51	60.05
EER97804	Sorghum	cytosol	49.06	51.73
EES01588	Sorghum	plastid	52.35	49.12
HORVU4Hr1G000590.6	Barley	mitochondrion	53.52	48.1
EES18122	Sorghum	plastid	52.11	46.84
EES18123	Sorghum	plastid	51.88	46.62
EER95576	Sorghum	cytosol	41.08	46.42
EER99879	Sorghum	plastid	49.77	46.09
EES00508	Sorghum	cytosol	48.83	45.22
EES19760	Sorghum	plastid	52.11	44.14
EES17638	Sorghum	peroxisome, plastid	45.54	43.4
EES10653	Sorghum	cytosol	48.83	42.98
EES05138	Sorghum	cytosol	49.3	41.02
KXG39633	Sorghum	plastid	38.03	40.5
EES19660	Sorghum	cytosol	38.73	38.55
OQU86038	Sorghum	plastid	40.61	37.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8062581	UniProt:C5X6P5	EnsemblPlants:EER96397
ProteinID:EER96397	ProteinID:EER96397.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF73	InterPro:Prot_kinase_dom
EnsemblPlantsGene:SORBI_3002G140200	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8367E	RefSeq:XP_002459876.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:22462141..22463833

Molecular Weight (calculated)

46274.0 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.245

Length

426 amino acids

Sequence
(BLAST)

001: MGILCCFQSH TGDGTAHHDH FVASSPATSS SSVPSSYRRA PPERQSAGVE KSSRRNDSID NSNLVALVND IVTESVSYHH RRVAEEILKM GKAGKVTARA
101: FTYAELCEAT GGFRPESLLG EGGFGPVYRG RLGSSSGPEV AVKQLDRNGM QGTREFLVEA LMLSLLKHPN LVTLLGFCTD ADHRMLIYEY MPLGSLEDHL
201: LDLPPGRAPL DWATRMGVAQ DAARGLEYLH DAAQPPVIYR DFKASNILLD TGFRARLSDF GLAKVGPVGD KTHVSTRVMG TYGYCAPEYA LTGKLTTMSD
301: VYSFGVVFLE IITGSRAIDT TRPPDKHNLV LWAGPRFKDK RRFAEMADPL LQGAYPTKGL YQALAIAAMC LQEDATMRPV ISDVVTALEY LTVAGGGAAD
401: EEPAPDPKQQ QQQQQIDVIG HADDQA

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.