CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18122	Sorghum	plastid	99.37	99.37
Zm00001d010492_P010	Maize	cytosol	93.88	93.88
TraesCS1D01G235800.1	Wheat	cytosol, nucleus, plastid	87.97	85.1
TraesCS1A01G236600.2	Wheat	cytosol, nucleus, plastid	87.55	84.87
Os05t0372100-01	Rice	cytosol, nucleus, plastid	87.34	84.32
HORVU1Hr1G058100.1	Barley	cytosol, nucleus, plastid	87.13	84.29
TraesCS1B01G247100.1	Wheat	cytosol	83.12	83.47
GSMUA_Achr8P00160_001	Banana	cytosol	68.99	78.23
GSMUA_Achr9P17690_001	Banana	cytosol, nucleus, plastid	45.36	76.79
GSMUA_Achr3P08930_001	Banana	cytosol	69.41	76.69
GSMUA_Achr10P...	Banana	cytosol	67.09	74.65
CDX88927	Canola	cytosol	66.88	71.4
GSMUA_Achr2P06850_001	Banana	cytosol	65.61	70.2
CDX70830	Canola	cytosol	67.93	68.8
Solyc01g067400.2.1	Tomato	cytosol	73.21	67.91
KRH21034	Soybean	cytosol, plastid	73.42	67.84
KRH11239	Soybean	cytosol, plastid	73.21	67.51
VIT_05s0020g01770.t01	Wine grape	cytosol	74.89	67.23
EER97804	Sorghum	cytosol	57.17	67.08
AT5G18610.2	Thale cress	plastid	72.57	67.06
CDX92596	Canola	plastid	66.46	66.6
GSMUA_Achr8P21930_001	Banana	cytosol, nucleus, plastid	66.03	66.45
EER99879	Sorghum	plastid	63.71	65.65
CDY13906	Canola	plastid	66.67	65.29
Bra002172.1-P	Field mustard	plastid	73.21	62.75
EES10653	Sorghum	cytosol	62.45	61.16
EES00508	Sorghum	cytosol	55.49	57.17
EES05138	Sorghum	cytosol	61.6	57.03
Bra006469.1-P	Field mustard	cytosol	72.57	55.94
EER95576	Sorghum	cytosol	41.56	52.25
EES17638	Sorghum	peroxisome, plastid	49.16	52.13
EER96397	Sorghum	cytosol	46.62	51.88
EES01588	Sorghum	plastid	48.73	50.88
KXG39633	Sorghum	plastid	39.66	47.0
EES19760	Sorghum	plastid	48.52	45.73
EES19660	Sorghum	cytosol	40.93	45.33
OQU86038	Sorghum	plastid	39.03	40.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EntrezGene:8077667	UniProt:C5YX82
EnsemblPlants:EES18123	ProteinID:EES18123	ProteinID:EES18123.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF50	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3009G117400	SUPFAM:SSF56112
unigene:Sbi.1474	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A88D2F	RefSeq:XP_002439693.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:46178216..46192907

Molecular Weight (calculated)

51811.5 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.573

Length

474 amino acids

Sequence
(BLAST)

001: MGCLPCFGSA GEGAAKKVGA RKDGSSDRRV TRVESDKSKA QGGPDSKKDA VILRDENNQH IAAHTFTFRE LAAATKNFRQ DCLLGEGGFG RVYKGRLENG
101: QVVAVKQLDR NGLQGNREFL VEVLMLSLLH HDNLVNLIGY CADGDQRLLV YEFMPLGSLE DHLHDIPPEK EPLDWNTRMK IAAGAAKGLE YLHDKASPPV
201: IYRDFKSSNI LLGEGFHPKL SDFGLAKLGP VGDKTHVSTR VMGTYGYCAP EYAMTGQLTV KSDVYSFGVV FLELITGRKA IDNTKPHGEQ NLVAWARPLF
301: KDRRKFPKMA DPLLQGRFPM RGLYQALAVA AMCLQEQAAT RPFIGDVVTA LSYLASQTYD PNAPVQHNRS NSSTPRVSRG GGSNDQRRLR SPNHHSPDLR
401: REATAASKYE AEVSRTNSGS GSGRRSGLDD VDMSGSQLGS PAHAGRKRGS PRTAESQRAI AETKTCGEKS RGRK

Best Arabidopsis Sequence Match ( AT5G18610.1 )
(BLAST)

001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND

Arabidopsis Description

PBL27Serine/threonine-protein kinase PBL27 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.