Factsheet for TraesCS1A01G236600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G235800.1	Wheat	cytosol, nucleus, plastid	99.18	98.98
HORVU1Hr1G058100.1	Barley	cytosol, nucleus, plastid	96.52	96.33
TraesCS1B01G247100.1	Wheat	cytosol	92.02	95.34
EES18123	Sorghum	plastid	84.87	87.55
EES18122	Sorghum	plastid	84.66	87.34
Zm00001d010492_P010	Maize	cytosol	84.46	87.13
Os05t0372100-01	Rice	cytosol, nucleus, plastid	86.71	86.35
TraesCS3A01G463400.1	Wheat	cytosol	79.35	80.17
GSMUA_Achr8P00160_001	Banana	cytosol	67.28	78.71
GSMUA_Achr9P17690_001	Banana	cytosol, nucleus, plastid	44.79	78.21
GSMUA_Achr3P08930_001	Banana	cytosol	66.87	76.22
CDX88927	Canola	cytosol	66.46	73.2
GSMUA_Achr10P...	Banana	cytosol	63.6	73.0
CDX70830	Canola	cytosol	67.89	70.94
GSMUA_Achr2P06850_001	Banana	cytosol	63.6	70.2
KRH21034	Soybean	cytosol, plastid	72.39	69.01
TraesCS2A01G081400.1	Wheat	plastid	57.06	68.89
Solyc01g067400.2.1	Tomato	cytosol	71.98	68.88
AT5G18610.2	Thale cress	plastid	72.19	68.81
KRH11239	Soybean	cytosol, plastid	72.19	68.68
GSMUA_Achr8P21930_001	Banana	cytosol, nucleus, plastid	65.03	67.52
VIT_05s0020g01770.t01	Wine grape	cytosol	72.8	67.42
CDX92596	Canola	plastid	65.03	67.23
CDY13906	Canola	plastid	66.26	66.94
TraesCS2A01G285700.1	Wheat	cytosol, plastid	62.58	64.29
Bra002172.1-P	Field mustard	plastid	71.78	63.47
TraesCS2A01G117800.2	Wheat	plastid	58.08	60.81
Bra006469.1-P	Field mustard	cytosol	72.19	57.4
TraesCS3A01G178800.2	Wheat	cytosol	53.78	56.56
TraesCS4A01G105100.1	Wheat	plastid	40.08	51.31
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	46.83	51.12
TraesCS3A01G537900.1	Wheat	cytosol	42.33	50.49
TraesCS3A01G326400.1	Wheat	plastid	45.4	50.0
TraesCS5A01G497600.2	Wheat	mitochondrion, plastid	40.08	50.0
TraesCS6A01G206300.2	Wheat	mitochondrion, plastid	40.08	50.0
TraesCS4A01G000300.1	Wheat	cytosol	44.38	47.07
TraesCS1A01G317300.1	Wheat	mitochondrion	45.19	41.62
TraesCS1A01G287900.1	Wheat	cytosol	38.65	40.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1A01G236600	EnsemblPlants:TraesCS1A01G236600.2	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr1A:-:419029499..419037309

Molecular Weight (calculated)

53827.5 Da

IEP (calculated)

9.803

GRAVY (calculated)

-0.690

Length

489 amino acids

Sequence
(BLAST)

001: MGCLPCFGSS GKGEPAKKGG ARKDVPSDRR ATGVGSDKPK PQGLLDSKDA VIPREGNNQH IAAHTFTFRE LAAATKNFRQ DCLLGEGGFG RVYRGRLDNG
101: QAVAVKQLDR NGLQGNREFL VEVLMLSLLH HDNLVNLIGY CADGDQRLLV YEYMPLGSLE DHLHDIPPEK EPLDWNTRMK IAAGAAKGLE YLHDKASPPV
201: IYRDFKSSNI LLGEEFHPKL SDFGLAKLGP VGDKTHVSTR VMGTYGYCAP EYAMTGQLTV KSDVYSFGVV FLELITGRKA IDNTKPHGEQ NLVAWARPLF
301: KDRRKFPKMA DPALQGRFPM RGLYQALAVA AMCLQEQAAT RPFIGDVVTA LSYLASQAYD PNAPTQHSRS NASTPRARDR GSVNGDQRRI RSPNHHSPDM
401: RRKEVTTTSK YEAEVSRNSS GGGSGRQSGL DDRDVTGSQQ GSPARAGKRR ETSRTSERQR AIAEAKTWGE NSRERKWPNA RGSFDSTNE

Best Arabidopsis Sequence Match ( AT5G18610.1 )
(BLAST)

001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND

Arabidopsis Description

PBL27Serine/threonine-protein kinase PBL27 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.