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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92596 Canola plastid 97.52 99.79
CDX88927 Canola cytosol 82.64 90.09
CDX70830 Canola cytosol 83.88 86.75
Bra002172.1-P Field mustard plastid 97.31 85.17
AT5G18610.2 Thale cress plastid 86.16 81.29
GSMUA_Achr8P00160_001 Banana cytosol 66.94 77.51
GSMUA_Achr3P08930_001 Banana cytosol 65.91 74.36
KRH11239 Soybean cytosol, plastid 76.65 72.18
CDY04867 Canola plastid 55.99 72.07
CDY55687 Canola plastid 55.79 72.0
KRH21034 Soybean cytosol, plastid 76.03 71.73
Solyc01g067400.2.1 Tomato cytosol 75.62 71.62
GSMUA_Achr10P... Banana cytosol 62.6 71.13
VIT_05s0020g01770.t01 Wine grape cytosol 77.27 70.83
GSMUA_Achr9P17690_001 Banana cytosol, nucleus, plastid 40.91 70.71
CDY57665 Canola cytosol 40.91 68.99
GSMUA_Achr2P06850_001 Banana cytosol 62.6 68.4
GSMUA_Achr8P21930_001 Banana cytosol, nucleus, plastid 66.32 68.15
CDX85669 Canola cytosol 60.74 68.06
CDX91145 Canola cytosol 60.74 67.9
Os01t0936100-01 Rice plasma membrane 68.59 67.62
HORVU1Hr1G058100.1 Barley cytosol, nucleus, plastid 67.98 67.14
TraesCS3B01G506600.1 Wheat cytosol 66.32 67.01
Zm00001d010492_P010 Maize cytosol 65.5 66.88
EES18122 Sorghum plastid 65.5 66.88
EES18123 Sorghum plastid 65.29 66.67
TraesCS1D01G235800.1 Wheat cytosol, nucleus, plastid 67.36 66.53
HORVU3Hr1G099120.1 Barley cytosol 66.74 66.46
Os05t0372100-01 Rice cytosol, nucleus, plastid 67.36 66.4
TraesCS1B01G247100.1 Wheat cytosol 64.67 66.31
TraesCS1A01G236600.2 Wheat cytosol, nucleus, plastid 66.94 66.26
TraesCS3A01G463400.1 Wheat cytosol 66.12 66.12
TraesCS3D01G457400.1 Wheat cytosol 66.12 66.12
Zm00001d011908_P001 Maize cytosol, nucleus, plastid 67.56 65.79
Zm00001d042185_P003 Maize cytosol 67.77 65.47
CDX78510 Canola cytosol 59.92 65.46
CDX97232 Canola cytosol 60.54 64.4
CDX69664 Canola cytosol 60.54 64.4
CDX82241 Canola cytosol 48.76 63.44
CDY36035 Canola cytosol 48.35 62.9
CDY19633 Canola cytosol, mitochondrion 47.93 62.87
CDY29433 Canola mitochondrion 47.93 62.53
CDX93611 Canola cytosol 50.83 61.65
CDY39784 Canola cytosol, plastid 47.93 61.38
CDY03295 Canola cytosol 47.52 60.85
CDY53627 Canola cytosol 61.16 60.16
CDY65598 Canola cytosol 48.14 59.74
CDX96628 Canola cytosol 46.07 59.15
CDY55594 Canola plastid 44.42 59.07
CDY33638 Canola cytosol 46.07 58.99
CDY43074 Canola mitochondrion 44.21 58.95
CDY06282 Canola cytosol 50.83 58.29
CDX95117 Canola cytosol 51.03 58.25
CDY31493 Canola cytosol 45.25 58.24
CDY32811 Canola cytosol 50.21 57.72
CDY66752 Canola cytosol 51.45 57.24
CDY29515 Canola cytosol 45.04 57.22
CDY05311 Canola cytosol 52.07 57.14
CDY08017 Canola cytosol 51.86 56.79
CDX74065 Canola cytosol 51.65 56.56
CDY34917 Canola cytosol 51.65 56.43
CDY24861 Canola cytosol, plastid 45.04 56.19
CDY25327 Canola cytosol, plastid 45.45 55.98
CDY47164 Canola cytosol, plastid 45.45 55.98
CDY22717 Canola cytosol 50.41 55.2
CDY01117 Canola cytosol 42.98 54.59
CDY47330 Canola cytosol 42.98 54.59
CDX88266 Canola cytosol, nucleus, plastid 43.18 54.57
CDX87608 Canola cytosol 42.98 54.31
CDX95766 Canola cytosol 47.93 53.95
CDX83297 Canola cytosol 47.93 53.83
CDX85945 Canola cytosol 42.36 53.81
CDX68101 Canola cytosol 42.15 53.54
CDY07261 Canola cytosol, plastid 27.89 52.53
CDY58830 Canola nucleus 50.21 43.55
CDY51533 Canola cytosol 45.25 39.75
CDY28710 Canola cytosol 44.63 39.06
CDX74234 Canola cytosol 43.8 37.32
CDY07262 Canola cytosol 4.55 37.29
CDX92014 Canola cytosol 43.59 37.08
CDX78694 Canola cytosol 41.74 35.07
CDX70697 Canola cytosol 41.94 34.7
CDY55581 Canola cytosol 41.53 34.3
CDX69447 Canola cytosol 41.94 34.23
CDY24650 Canola mitochondrion 52.07 21.12
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1MapMan:26.8.1.2.3Gene3D:3.30.200.20GO:A0A078FLA4UniProt:A0A078FLA4
EnsemblPlants:CDY13906ProteinID:CDY13906ProteinID:CDY13906.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00078373001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF505InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE95BBSEG:seg:
Description
BnaC09g39200DBnaC09g39200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLA4]
Coordinates
chrLK032039:+:97536..100371
Molecular Weight (calculated)
52805.5 Da
IEP (calculated)
7.638
GRAVY (calculated)
-0.495
Length
484 amino acids
Sequence
(BLAST)
001: MSGCLPCFGS SAKDAASKDS VKKEASAKAK DASVTQSHHV SLDKSKSKGG SEQKKELTAP KEGPTAHIAA QTFTFRELAA ATKNFRPDCL LGEGGFGRVY
101: KGRLETTGQI VAVKQLDRNG LQGNREFLVE VLMLSLLHHT NLVNLIGYCA DGDQRLLVYE YMPLGSLEDH LHDLPPDKEP LDWNTRMTIA AGAAKGLEYL
201: HDKANPPVIY RDLKSSNILL GDGYHPKLSD FGLAKLGPVG DKTHVSTRVM GTYGYCAPEY AMTGQLTLKS DVYSFGVVFL ELITGRKAID NARAHGEHNL
301: VAWARPLFKD RRKFPKMADP SLQGRYPMRG LYQALAVAAM CLQEQAATRP LIGDVVTALT YLASQTFDPN AASSQNSRSG SGGGGPPSLD SPAETRSRLG
401: NRDLDRERAV AEAKVWGENW RERKRGINGP GSFDSEGREG SYETFVESGR VGQLSDLMSE SEERLFNIVV EAQEHDANDK RLGN
Best Arabidopsis Sequence Match ( AT5G18610.1 )
(BLAST)
001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND
Arabidopsis Description
PBL27Serine/threonine-protein kinase PBL27 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDV6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.