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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plasma membrane 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69664 plasma membrane
CDX72769
CDX78510 plasma membrane
CDX85669 plasma membrane
CDX91145 plasma membrane
CDX96295
CDX97232 plasma membrane
CDY53627 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13160.1 CDX72769 AT1G71020.1 21798944
AT5G13160.1 CDX96295 AT1G71020.1 21798944
AT5G13160.1 CDX69664 AT5G13160.1 24225654
AT5G13160.1 CDX78510 AT5G13160.1 24225654
AT5G13160.1 CDX85669 AT5G13160.1 24225654
AT5G13160.1 CDX91145 AT5G13160.1 24225654
AT5G13160.1 CDX97232 AT5G13160.1 24225654
AT5G13160.1 CDY53627 AT5G13160.1 24225654
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78510 Canola cytosol 82.11 91.2
CDX85669 Canola cytosol 75.2 85.65
CDX91145 Canola cytosol 75.2 85.45
AT5G13160.1 Thale cress cytosol 78.86 85.09
CDX69664 Canola cytosol 77.64 83.96
CDX97232 Canola cytosol 77.44 83.74
GSMUA_Achr5P25020_001 Banana cytosol 64.23 74.18
KRH46858 Soybean cytosol 69.51 72.92
Solyc05g024290.2.1 Tomato cytosol 68.5 72.47
VIT_01s0146g00250.t01 Wine grape cytosol 68.09 72.2
KRH36361 Soybean cytosol 67.28 71.96
PGSC0003DMT400021929 Potato cytosol 67.89 71.37
KRG93133 Soybean cytosol 67.07 70.82
GSMUA_Achr9P01200_001 Banana cytosol 40.24 69.72
CDY57665 Canola cytosol 39.84 68.29
CDX88927 Canola cytosol 60.37 66.89
GSMUA_Achr9P29230_001 Banana cytosol 58.13 66.05
Os04t0393900-01 Rice plasma membrane 60.16 65.2
TraesCS2B01G302800.1 Wheat cytosol, plastid 61.79 64.27
CDY04867 Canola plastid 48.98 64.1
TraesCS2D01G284200.1 Wheat cytosol 61.59 63.66
CDY55687 Canola plastid 48.37 63.47
TraesCS2A01G285700.1 Wheat cytosol, plastid 61.18 63.24
HORVU2Hr1G070690.2 Barley cytosol 61.38 63.05
CDX70830 Canola cytosol 59.96 63.03
EES10653 Sorghum cytosol 61.99 63.02
Zm00001d003925_P001 Maize cytosol, nucleus, plastid 61.79 62.55
CDX92596 Canola plastid 59.96 62.37
GSMUA_Achr6P20850_001 Banana cytosol 58.74 62.28
CDY13906 Canola plastid 60.16 61.16
Zm00001d016591_P002 Maize cytosol 62.4 60.31
CDX82241 Canola cytosol 45.53 60.22
CDY19633 Canola cytosol, mitochondrion 45.12 60.16
EES05138 Sorghum cytosol 62.6 60.16
Zm00001d050575_P001 Maize cytosol 63.21 60.04
CDY36035 Canola cytosol 45.33 59.95
CDY29433 Canola mitochondrion 45.12 59.84
CDY03295 Canola cytosol 45.73 59.52
CDY39784 Canola cytosol, plastid 45.73 59.52
Os02t0513000-01 Rice plasma membrane 63.01 58.94
CDX93611 Canola cytosol 46.14 56.89
CDY55594 Canola plastid 42.07 56.87
CDY43074 Canola mitochondrion 41.87 56.75
CDX96628 Canola cytosol 42.68 55.7
CDY33638 Canola cytosol 42.68 55.56
CDY25327 Canola cytosol, plastid 44.31 55.47
CDY47164 Canola cytosol, plastid 44.31 55.47
CDY24861 Canola cytosol, plastid 43.7 55.41
CDY32811 Canola cytosol 46.95 54.87
CDY65598 Canola cytosol 43.09 54.36
CDY06282 Canola cytosol 46.54 54.27
CDY31493 Canola cytosol 41.46 54.26
CDX95117 Canola cytosol 46.75 54.25
CDY47330 Canola cytosol 41.67 53.81
CDY01117 Canola cytosol 41.67 53.81
CDY29515 Canola cytosol 41.46 53.54
CDY07261 Canola cytosol, plastid 27.64 52.92
CDX88266 Canola cytosol, nucleus, plastid 41.06 52.74
CDY66752 Canola cytosol 46.54 52.64
CDX87608 Canola cytosol 40.65 52.22
CDY08017 Canola cytosol 46.75 52.04
CDX74065 Canola cytosol 46.75 52.04
CDY05311 Canola cytosol 46.34 51.7
CDY34917 Canola cytosol 46.34 51.47
CDY22717 Canola cytosol 45.94 51.13
CDX83297 Canola cytosol 44.72 51.04
CDX68101 Canola cytosol 39.43 50.92
CDX85945 Canola cytosol 39.43 50.92
CDX95766 Canola cytosol 43.9 50.23
CDY58830 Canola nucleus 46.95 41.4
CDY51533 Canola cytosol 42.89 38.29
CDY28710 Canola cytosol 42.28 37.61
CDX74234 Canola cytosol 41.46 35.92
CDX92014 Canola cytosol 41.46 35.85
CDY07262 Canola cytosol 4.27 35.59
CDX78694 Canola cytosol 39.63 33.85
CDY55581 Canola cytosol 40.04 33.62
CDX70697 Canola cytosol 39.84 33.5
CDX69447 Canola cytosol 40.24 33.39
CDY24650 Canola mitochondrion 46.95 19.36
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1MapMan:26.8.1.2.3Gene3D:3.30.200.20GO:A0A078IUE7UniProt:A0A078IUE7
EnsemblPlants:CDY53627ProteinID:CDY53627ProteinID:CDY53627.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00011097001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF491InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE7DB4:::
Description
BnaC03g71490DBnaC03g71490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUE7]
Coordinates
chrLK033221:-:61262..63756
Molecular Weight (calculated)
55038.1 Da
IEP (calculated)
9.463
GRAVY (calculated)
-0.413
Length
492 amino acids
Sequence
(BLAST)
001: MVDKEKKKTF LLRMESQFPS FLSGYSQSFW LFRSCSKGLC KFLITILHPL CQTLSGRRWV VSRVFIRVKE SKPQKQSQTI VSNNFSTLPS GGEKKLSSKS
101: NVRSKRELLL PRDGLEQIAA HTFAFRELVA ATMNFHPDTF LGEGGFGCVY KGRLESTGQV VAVKQLDRNG LQGNREFLVE VLMLSLLHHP NLVNLIGYCA
201: DGDQRLLVYE FMPLGSLEDH LHDLPPDKEA LDWNTRMKIA AGAAKGLEFL HDKANPPVIY RDFKSSNILL GEGFHPKLSD FGLAKLGPTG DKSHVSTRVM
301: GTYGYCAPEY AMTGQLTVKS DVYSFGVVFL ELITGRKAID SEMPHGEQNL VAWARPMFND RRKFIKLADP KLKGRFPTRA LYQALSVASM CIQEEAATRP
401: LIADVVTALS YLANQAYDPN KNERGGGKLI TRDDEGGGSE KEDSPRETAR ILNRDIDRER AVAEAKMWGE SLREKRRQSE QGTSESNSTG SK
Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)
001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV
Arabidopsis Description
PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.