CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55594	Canola	plastid	98.62	98.35
CDY57665	Canola	cytosol	71.07	89.9
AT3G20530.1	Thale cress	mitochondrion	91.18	85.75
CDY36035	Canola	cytosol	86.23	84.14
CDX82241	Canola	cytosol	85.4	83.33
CDY19633	Canola	cytosol, mitochondrion	83.2	81.84
CDY29433	Canola	mitochondrion	83.2	81.4
VIT_19s0090g00030.t01	Wine grape	mitochondrion	64.19	66.19
PGSC0003DMT400037295	Potato	cytosol	69.15	63.38
KRH14431	Soybean	cytosol	65.56	62.8
KRH73720	Soybean	plastid	65.01	62.27
Solyc10g006340.2.1	Tomato	cytosol	67.49	60.34
KRH46122	Soybean	cytosol	68.04	59.95
Solyc12g005160.1.1	Tomato	cytosol	64.74	58.31
PGSC0003DMT400002807	Potato	cytosol	65.29	58.09
PGSC0003DMT400036145	Potato	cytosol	61.98	57.11
Solyc07g064340.2.1	Tomato	plasma membrane	62.53	54.83
CDY07261	Canola	cytosol, plastid	36.91	52.14
CDY24861	Canola	cytosol, plastid	55.1	51.55
CDY03295	Canola	cytosol	53.44	51.32
CDY47164	Canola	cytosol, plastid	55.37	51.15
CDY39784	Canola	cytosol, plastid	53.17	51.06
CDY65598	Canola	cytosol	54.82	51.03
CDY55687	Canola	plastid	52.62	50.93
CDY25327	Canola	cytosol, plastid	55.1	50.89
CDY04867	Canola	plastid	52.62	50.8
CDX96628	Canola	cytosol	50.96	49.07
CDY33638	Canola	cytosol	50.96	48.94
CDX85669	Canola	cytosol	58.13	48.84
CDX91145	Canola	cytosol	58.13	48.73
CDY31493	Canola	cytosol	50.41	48.67
CDX93611	Canola	cytosol	53.44	48.62
CDX88927	Canola	cytosol	59.23	48.42
CDY29515	Canola	cytosol	50.69	48.29
CDY47330	Canola	cytosol	49.31	46.98
CDY66752	Canola	cytosol	56.2	46.9
CDX69664	Canola	cytosol	58.68	46.81
CDX97232	Canola	cytosol	58.68	46.81
CDY01117	Canola	cytosol	49.04	46.72
CDY06282	Canola	cytosol	53.99	46.45
CDX78510	Canola	cytosol	56.47	46.28
CDX88266	Canola	cytosol, nucleus, plastid	48.76	46.21
CDX74065	Canola	cytosol	56.2	46.15
CDY08017	Canola	cytosol	56.2	46.15
CDY32811	Canola	cytosol	53.44	46.08
CDX95117	Canola	cytosol	53.72	45.99
CDX85945	Canola	cytosol	48.21	45.93
CDY34917	Canola	cytosol	55.92	45.82
CDY05311	Canola	cytosol	55.65	45.8
CDX70830	Canola	cytosol	58.95	45.73
CDX87608	Canola	cytosol	48.21	45.69
CDX68101	Canola	cytosol	47.93	45.67
CDX92596	Canola	plastid	58.95	45.24
CDY13906	Canola	plastid	58.95	44.21
CDY22717	Canola	cytosol	53.17	43.67
CDX95766	Canola	cytosol	51.52	43.49
CDX83297	Canola	cytosol	51.52	43.39
CDY53627	Canola	cytosol	56.75	41.87
CDY58830	Canola	nucleus	53.72	34.95
CDY07262	Canola	cytosol	5.51	33.9
CDY51533	Canola	cytosol	47.93	31.58
CDY28710	Canola	cytosol	47.11	30.92
CDX92014	Canola	cytosol	45.73	29.17
CDX74234	Canola	cytosol	45.45	29.05
CDX78694	Canola	cytosol	45.18	28.47
CDX70697	Canola	cytosol	45.18	28.03
CDX69447	Canola	cytosol	45.45	27.82
CDY55581	Canola	cytosol	44.9	27.82
CDY24650	Canola	mitochondrion	55.92	17.02

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078I0K3	UniProt:A0A078I0K3	EnsemblPlants:CDY43074
ProteinID:CDY43074	ProteinID:CDY43074.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00075919001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE36B0	SEG:seg	:	:	:	:

Description

BnaCnng10800DBnaCnng10800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0K3]

Coordinates

chrLK032544:-:120805..123098

Molecular Weight (calculated)

41088.2 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.460

Length

363 amino acids

Sequence
(BLAST)

001: MKLNCLFCCM SERRFTRRSS SIPSIKDCIH ANNNLSRFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPENQLGE GGFGRVYKGH
101: IETPEKVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYECMQ NGSLEDHLLE LVRNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT FGVVFLEMIT GRRVIDTKKP TQEQNLVTWA SPLFKDKRKF TLMADPLLEG
301: KYPIKGLYQA LAVAAMCLQE EAETRPTMSD VVTALEYLGV TKVEENNETD NNNNKEEGED ERS

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.