Factsheet for Solyc10g006340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037295	Potato	cytosol	93.84	96.21
CDY57665	Canola	cytosol	51.97	73.52
Bra023944.1-P	Field mustard	cytosol	62.32	71.88
KRH14431	Soybean	cytosol	66.01	70.71
CDX82241	Canola	cytosol	63.55	69.35
VIT_19s0090g00030.t01	Wine grape	mitochondrion	60.1	69.32
CDY36035	Canola	cytosol	63.3	69.09
Bra001791.1-P	Field mustard	cytosol	61.58	68.87
KRH73720	Soybean	plastid	64.29	68.87
Solyc12g005160.1.1	Tomato	cytosol	67.73	68.24
CDY29433	Canola	mitochondrion	62.32	68.19
AT3G20530.1	Thale cress	mitochondrion	64.78	68.13
CDY55594	Canola	plastid	60.84	67.86
CDY19633	Canola	cytosol, mitochondrion	61.58	67.75
CDY43074	Canola	mitochondrion	60.34	67.49
KRH46122	Soybean	cytosol	67.98	66.99
Solyc07g064340.2.1	Tomato	plasma membrane	65.52	64.25
Solyc10g085990.1.1	Tomato	plastid	53.69	58.76
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	55.91	58.06
Solyc10g005300.2.1	Tomato	cytosol, mitochondrion	54.43	56.81
Solyc04g082510.2.1	Tomato	plastid	48.77	53.51
Solyc05g024290.2.1	Tomato	cytosol	57.88	50.54
Solyc06g075550.2.1	Tomato	cytosol, nucleus	50.74	50.12
Solyc06g083500.2.1	Tomato	nucleus	52.22	48.62
Solyc12g094680.1.1	Tomato	cytosol	47.78	48.5
Solyc09g061330.1.1	Tomato	plastid	52.71	47.98
Solyc01g067400.2.1	Tomato	cytosol	58.13	46.18
Solyc11g072660.1.1	Tomato	cytosol	50.74	42.92
Solyc02g094380.1.1	Tomato	cytosol	42.36	40.38
Solyc05g055860.2.1	Tomato	cytosol	46.55	38.89
Solyc04g050970.2.1	Tomato	plastid	50.0	36.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4CXG5	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g006340.2	EnsemblPlants:Solyc10g006340.2.1	UniParc:UPI000276AB8A	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:972310..974968

Molecular Weight (calculated)

45561.4 Da

IEP (calculated)

7.522

GRAVY (calculated)

-0.518

Length

406 amino acids

Sequence
(BLAST)

001: MKFGSKNKMK MKMKMNCFRC CVANEDHKKT LKKNNQEHKN NKSQSSFDNL SLKTDSNRRK YIAEEIAKLG KGNISAEIFS YLELKIATQN FNNDRLLGEG
101: GFGRVYKGHI ESKNLDVAVK QLDRNGFQGT REFLVEVLIL SLLHHPNLVN LVGYCSDGDQ RILVYEYMPN GSLEDHLLET SPDRKPLDWD TRMKIAEGAA
201: KGLEYLHEKA NPPVIYRDFK ASNILLDENF DPKLSDFGLA KLGPTGDKSH VSTRVMGTYG YCAPEYASTG QLTTKSDVYS FGVVFLEMIT GRRVIDTSKP
301: SEEQDLVLWA QPLFRNKKKF HLMVDPLLEG NYPRKGLCQA LAIAAMCLQN DASVRPLISD VVTALAFLAG NKKKDEDEEE AALDTPKTPL QSNTENIGTN
401: EASVDT

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.