CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29433	Canola	mitochondrion	97.02	96.5
CDY57665	Canola	cytosol	67.75	87.11
AT3G20530.1	Thale cress	mitochondrion	88.62	84.72
CDY36035	Canola	cytosol	84.82	84.14
CDY43074	Canola	mitochondrion	81.84	83.2
CDX82241	Canola	cytosol	83.74	83.06
CDY55594	Canola	plastid	81.84	82.97
VIT_19s0090g00030.t01	Wine grape	mitochondrion	66.4	69.6
KRH14431	Soybean	cytosol	67.48	65.7
KRH73720	Soybean	plastid	66.94	65.17
PGSC0003DMT400037295	Potato	cytosol	69.38	64.65
Solyc10g006340.2.1	Tomato	cytosol	67.75	61.58
KRH46122	Soybean	cytosol	68.56	61.41
Solyc12g005160.1.1	Tomato	cytosol	66.94	61.29
PGSC0003DMT400002807	Potato	cytosol	67.21	60.78
PGSC0003DMT400036145	Potato	cytosol	63.14	59.14
CDY55687	Canola	plastid	58.27	57.33
Solyc07g064340.2.1	Tomato	plasma membrane	63.96	57.0
CDY04867	Canola	plastid	57.72	56.65
CDY03295	Canola	cytosol	56.64	55.29
CDY39784	Canola	cytosol, plastid	56.37	55.03
CDY24861	Canola	cytosol, plastid	57.72	54.9
CDY47164	Canola	cytosol, plastid	57.99	54.45
CDY25327	Canola	cytosol, plastid	57.72	54.2
CDY65598	Canola	cytosol	56.64	53.59
CDX96628	Canola	cytosol	54.2	53.05
CDY29515	Canola	cytosol	54.74	53.02
CDY33638	Canola	cytosol	54.2	52.91
CDX93611	Canola	cytosol	57.18	52.88
CDY31493	Canola	cytosol	53.66	52.66
CDX88927	Canola	cytosol	63.14	52.48
CDX85669	Canola	cytosol	60.7	51.85
CDX91145	Canola	cytosol	60.7	51.73
CDY06282	Canola	cytosol	57.72	50.47
CDY47330	Canola	cytosol	52.03	50.39
CDX95117	Canola	cytosol	57.72	50.24
CDY01117	Canola	cytosol	51.76	50.13
CDY32811	Canola	cytosol	57.18	50.12
CDX78510	Canola	cytosol	60.16	50.11
CDX97232	Canola	cytosol	61.52	49.89
CDX69664	Canola	cytosol	61.52	49.89
CDX88266	Canola	cytosol, nucleus, plastid	51.76	49.87
CDX70830	Canola	cytosol	62.87	49.57
CDY66752	Canola	cytosol	58.27	49.43
CDY07261	Canola	cytosol, plastid	34.42	49.42
CDX92596	Canola	plastid	62.87	49.05
CDY08017	Canola	cytosol	58.54	48.87
CDX74065	Canola	cytosol	58.54	48.87
CDX87608	Canola	cytosol	50.68	48.83
CDX85945	Canola	cytosol	50.41	48.82
CDY34917	Canola	cytosol	57.99	48.31
CDX68101	Canola	cytosol	49.86	48.29
CDY05311	Canola	cytosol	57.45	48.07
CDY13906	Canola	plastid	62.87	47.93
CDX95766	Canola	cytosol	55.56	47.67
CDY22717	Canola	cytosol	56.91	47.51
CDX83297	Canola	cytosol	55.01	47.1
CDY53627	Canola	cytosol	60.16	45.12
CDY58830	Canola	nucleus	57.45	37.99
CDY51533	Canola	cytosol	51.76	34.66
CDY28710	Canola	cytosol	50.95	34.0
CDX74234	Canola	cytosol	49.59	32.22
CDY07262	Canola	cytosol	5.15	32.2
CDX92014	Canola	cytosol	49.59	32.16
CDX78694	Canola	cytosol	47.7	30.56
CDX70697	Canola	cytosol	47.7	30.09
CDY55581	Canola	cytosol	47.43	29.86
CDX69447	Canola	cytosol	47.97	29.85
CDY24650	Canola	mitochondrion	57.72	17.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078G4M2	UniProt:A0A078G4M2	EnsemblPlants:CDY19633
ProteinID:CDY19633	ProteinID:CDY19633.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00009306001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE93D4	SEG:seg	:	:	:

Description

BnaA05g20410DBnaA05g20410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4M2]

Coordinates

chrLK032098:-:680540..682120

Molecular Weight (calculated)

41973.3 Da

IEP (calculated)

6.382

GRAVY (calculated)

-0.376

Length

369 amino acids

Sequence
(BLAST)

001: MKTCLFCCMS ERRFTRRSSS RQSIKEFDNI SFKTDSSRRR YIYEEITKLG RRNISAQIFT FQDLSVATRN FDPENQLGEG GFGRVYKGYI ETNDKVVAVK
101: QLDRNGYQGN REFLVEVMML GLLHHQNLVN LVGYCADGDQ RILVYEYMQN GSLEDHLLEL VRNKKKPLDW DTRMKVAAGA ARGLEYLHET ADPPVIYRDF
201: KTSNILLDEE FNPKLSDFGL AKVGPTGGET HVSTRVMGTY GYCAPEYALT GQLTVKSDVY SFGVVFLEMI TGRRVIDPTK PTQEENLVTW ASPLFKDRRK
301: FTLMADPLLE GKYPIIGLYQ ALAVAAMCLQ EEAATRPMMS DVVSALEYLA MTKDKVDAEA VEDKGNYYN

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.