Factsheet for PGSC0003DMT400002807

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005160.1.1	Tomato	cytosol	96.32	97.52
CDY57665	Canola	cytosol	51.72	73.52
PGSC0003DMT400037295	Potato	cytosol	68.14	70.2
Bra023944.1-P	Field mustard	cytosol	60.54	70.17
PGSC0003DMT400036145	Potato	cytosol	67.16	69.54
Bra001791.1-P	Field mustard	cytosol	61.27	68.87
VIT_19s0090g00030.t01	Wine grape	mitochondrion	59.07	68.47
CDY29433	Canola	mitochondrion	61.76	67.92
CDX82241	Canola	cytosol	61.76	67.74
CDY36035	Canola	cytosol	61.76	67.74
CDY19633	Canola	cytosol, mitochondrion	60.78	67.21
KRH14431	Soybean	cytosol	62.25	67.02
AT3G20530.1	Thale cress	mitochondrion	62.99	66.58
KRH73720	Soybean	plastid	61.27	65.96
KRH46122	Soybean	cytosol	66.42	65.78
CDY43074	Canola	mitochondrion	58.09	65.29
CDY55594	Canola	plastid	57.84	64.84
PGSC0003DMT400045344	Potato	plastid	52.21	57.41
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	52.7	55.41
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	52.94	55.38
PGSC0003DMT400025866	Potato	cytosol	47.06	51.89
PGSC0003DMT400016900	Potato	cytosol	48.04	47.8
PGSC0003DMT400045499	Potato	cytosol, plastid	50.74	46.83
PGSC0003DMT400021929	Potato	cytosol	53.43	46.58
PGSC0003DMT400051759	Potato	nucleus	49.51	46.12
PGSC0003DMT400065260	Potato	cytosol	48.04	42.33
PGSC0003DMT400052190	Potato	cytosol	41.42	37.64
PGSC0003DMT400060019	Potato	cytosol	45.1	36.73
PGSC0003DMT400031291	Potato	cytosol	49.02	35.71

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZKP7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400001091	PGSC:PGSC0003DMG400001091
EnsemblPlants:PGSC0003DMT400002807	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF127	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002953358
SEG:seg	:	:	:	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400001091]

Coordinates

chr12:-:8561995..8564358

Molecular Weight (calculated)

45662.8 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.473

Length

408 amino acids

Sequence
(BLAST)

001: MSSSSDQDKI NHKNSLAKSI HHQEQQKDTK SIASFANISI KTDSSRRRYI VEEIEKYGKG NISAQTITYN DFCLATNNFD SECLLGEGGF GKVYKGHIQS
101: KNIDVAVKQL DRNGFQGNRE FLVEVLLLSL LHHPNLVTLE AYCSDGDQRV LVYEFMSNGS LEDHLLEIGP EQKPLDWITR MKIAEGAAKG LEYLHETANP
201: SVIYRDFKAS NILLDEKFNP KLSDFGLAKL GPTGDQTHVS TRVMGTYGYC APEYASTGQL TTKSDVYSFG VVFLEIITGR RVIDNSLPSE EQNLVVWATP
301: LFRDKTKFHL MADPLMGGDY PMKALYQALA IAAMCLQEEA STRPLMSDVV TALEFLSGNK KELDAEDEDE DEEKVTEETC KSPPALQSFT SRLERAESHD
401: TNGIRERD

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.