Factsheet for PGSC0003DMT400045499

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g061330.1.1	Tomato	plastid	96.83	95.96
Bra036670.1-P	Field mustard	cytosol	56.56	66.14
CDY39784	Canola	cytosol, plastid	56.33	65.87
CDY03295	Canola	cytosol	56.11	65.61
GSMUA_Achr5P29320_001	Banana	cytosol	53.17	64.38
AT3G24790.2	Thale cress	plastid	55.2	64.04
CDY65598	Canola	cytosol	55.43	62.82
PGSC0003DMT400051759	Potato	nucleus	62.22	62.79
KRH46760	Soybean	cytosol	61.76	62.47
AT3G07070.1	Thale cress	cytosol	58.14	62.08
VIT_07s0005g06450.t01	Wine grape	plastid	58.6	60.66
GSMUA_Achr6P15570_001	Banana	cytosol	52.26	60.47
GSMUA_Achr10P...	Banana	cytosol, plastid	57.24	59.39
PGSC0003DMT400045344	Potato	plastid	49.77	59.3
CDX74065	Canola	cytosol	58.82	58.82
CDY08017	Canola	cytosol	58.82	58.82
Bra001233.1-P	Field mustard	cytosol	58.82	58.82
CDY05311	Canola	cytosol	58.37	58.5
GSMUA_Achr8P02730_001	Banana	cytosol	49.09	58.18
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	45.02	57.68
AT4G13190.1	Thale cress	cytosol	50.68	57.58
CDY66752	Canola	cytosol	56.56	57.47
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	50.68	57.44
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	50.23	57.22
Bra040358.1-P	Field mustard	cytosol	56.56	56.43
CDY34917	Canola	cytosol	56.56	56.43
PGSC0003DMT400025866	Potato	cytosol	46.61	55.68
CDY47330	Canola	cytosol	47.96	55.64
CDY01117	Canola	cytosol	47.74	55.38
Bra032694.1-P	Field mustard	cytosol	47.74	54.95
KRG99800	Soybean	cytosol	59.05	54.26
PGSC0003DMT400037295	Potato	cytosol	47.29	52.78
TraesCS3D01G543300.1	Wheat	cytosol	47.51	52.76
TraesCS1D01G067700.1	Wheat	plastid	52.49	51.79
HORVU1Hr1G013840.1	Barley	mitochondrion	52.04	51.69
PGSC0003DMT400036145	Potato	cytosol	45.93	51.52
EES17638	Sorghum	peroxisome, plastid	51.81	51.23
TraesCS3A01G537900.1	Wheat	cytosol	47.51	51.22
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	51.81	51.12
TraesCS3B01G603300.1	Wheat	cytosol, plastid	47.51	51.09
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	50.0	51.04
TraesCS1B01G085000.1	Wheat	plastid	51.58	51.01
HORVU3Hr1G117850.1	Barley	cytosol	45.93	50.75
PGSC0003DMT400002807	Potato	cytosol	46.83	50.74
PGSC0003DMT400021929	Potato	cytosol	53.62	50.64
PGSC0003DMT400016900	Potato	cytosol	46.61	50.24
Os05t0125400-00	Rice	cytosol	49.77	50.0
PGSC0003DMT400052190	Potato	cytosol	45.02	44.32
PGSC0003DMT400065260	Potato	cytosol	46.38	44.28
Zm00001d041938_P001	Maize	plastid	47.29	43.82
PGSC0003DMT400060019	Potato	cytosol	49.55	43.71
PGSC0003DMT400031291	Potato	cytosol	50.23	39.64
Bra029618.1-P	Field mustard	mitochondrion	58.14	21.56
CDY24650	Canola	mitochondrion	57.92	21.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591936	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BHR7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400017650
PGSC:PGSC0003DMG400017650	EnsemblPlants:PGSC0003DMT400045499	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002969350	RefSeq:XP_006356786.1	SEG:seg	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017650]

Coordinates

chr9:-:44062966..44065820

Molecular Weight (calculated)

49468.8 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.500

Length

442 amino acids

Sequence
(BLAST)

001: MGCFSCFSSQ EKKAFKRIHS KSKETSDVVR QRETLLHQQQ QQRPHSLSRP KPQQDQRSHS QPLSENTRKV PAETTHQKSS NKGESQNIAA QTFTFRELAT
101: ATKNFRSECL IGEGGFGRVY KGHLNKTGQT VAVKQLDRNG LQGNREFLVE VLMLSLLHHS NLVNLIGYCA DGDQRLLVYE YMSLGSLEDH LLDLERDKLP
201: LDWFTRMKIA LHAANGLEYL HHRANPPVIY RDLKSSNILL DKEHNAKLSD FGLAKVGPTG ENTHVSSRVM GTYGYCAPEY QQTGKLTIKS DVYSFGVVLL
301: ELITGRRAVD ITRFGHQQNL VTWAEPIFKD TKRHIELADP LLGANFPRKN FSQAVAIASM CLQDDPVVRP LISDVVTALS TLSVPDSPFA SPTRAPPPMH
401: MSTEDNIIST RECQEELAEA IEWGSNSRKQ NARSLASCGS SV

Best Arabidopsis Sequence Match ( AT3G07070.1 )
(BLAST)

001: MNCFSCFYFH EKKKVPRDSD NSYRRNGEVT GRDNNKTHPE NPKTVNEQNK NNDEDKEVTN NIAAQTFSFR ELATATKNFR QECLIGEGGF GRVYKGKLEK
101: TGMIVAVKQL DRNGLQGNKE FIVEVLMLSL LHHKHLVNLI GYCADGDQRL LVYEYMSRGS LEDHLLDLTP DQIPLDWDTR IRIALGAAMG LEYLHDKANP
201: PVIYRDLKAA NILLDGEFNA KLSDFGLAKL GPVGDKQHVS SRVMGTYGYC APEYQRTGQL TTKSDVYSFG VVLLELITGR RVIDTTRPKD EQNLVTWAQP
301: VFKEPSRFPE LADPSLEGVF PEKALNQAVA VAAMCLQEEA TVRPLMSDVV TALGFLGTAP DGSISVPHYD DPPQPSDETS VEDSVAAEER ERAVAEAMEW
401: GVASRAHSRN PSAS

Arabidopsis Description

PBL26Probable serine/threonine-protein kinase PBL26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.