Factsheet for PGSC0003DMT400065260

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g072660.1.1	Tomato	cytosol	94.82	91.46
PGSC0003DMT400016900	Potato	cytosol	62.63	70.73
Bra000486.1-P	Field mustard	cytosol	48.81	66.08
CDX93611	Canola	cytosol	56.8	65.91
KRH24971	Soybean	cytosol	58.53	65.3
KRG88698	Soybean	cytosol	58.1	64.66
PGSC0003DMT400045344	Potato	plastid	51.62	64.42
Os07t0695300-01	Rice	cytosol, plastid	54.0	64.1
Bra018678.1-P	Field mustard	cytosol	57.02	63.16
CDY32811	Canola	cytosol	57.24	62.95
Bra030705.1-P	Field mustard	cytosol	56.59	62.83
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	58.1	62.27
TraesCS2B01G096000.1	Wheat	cytosol, plastid	54.0	61.88
TraesCS2A01G081400.1	Wheat	plastid	54.0	61.73
TraesCS2D01G079200.1	Wheat	plastid	54.0	61.73
EER97804	Sorghum	cytosol	53.78	61.63
CDY06282	Canola	cytosol	56.16	61.61
CDX95117	Canola	cytosol	56.37	61.56
Bra031596.1-P	Field mustard	cytosol	56.16	61.47
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	51.62	61.28
AT2G28590.1	Thale cress	cytosol	54.21	59.2
CDX95766	Canola	cytosol	53.78	57.91
CDX83297	Canola	cytosol	53.35	57.31
CDY22717	Canola	cytosol	54.64	57.24
PGSC0003DMT400025866	Potato	cytosol	45.36	56.76
KRH10353	Soybean	cytosol	58.1	55.46
KRH22964	Soybean	cytosol	56.8	55.37
HORVU2Hr1G013440.2	Barley	plastid	53.78	54.01
PGSC0003DMT400029366	Potato	cytosol, mitochondrion	43.63	52.06
PGSC0003DMT400037295	Potato	cytosol	44.49	52.02
PGSC0003DMT400021929	Potato	cytosol	50.11	49.57
PGSC0003DMT400036145	Potato	cytosol	41.9	49.24
AT1G07870.2	Thale cress	cytosol	56.37	48.51
PGSC0003DMT400002807	Potato	cytosol	42.33	48.04
CDY58830	Canola	nucleus	56.59	46.95
PGSC0003DMT400045499	Potato	cytosol, plastid	44.28	46.38
PGSC0003DMT400052190	Potato	cytosol	42.98	44.32
PGSC0003DMT400051759	Potato	nucleus	41.9	44.29
PGSC0003DMT400060019	Potato	cytosol	39.52	36.53
PGSC0003DMT400031291	Potato	cytosol	41.9	34.64

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102602028	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CDN2	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400025365
PGSC:PGSC0003DMG400025365	EnsemblPlants:PGSC0003DMT400065260	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF63	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002949D9E	RefSeq:XP_006365145.1	SEG:seg	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400025365]

Coordinates

chr11:+:44644017..44648951

Molecular Weight (calculated)

51888.8 Da

IEP (calculated)

8.931

GRAVY (calculated)

-0.636

Length

463 amino acids

Sequence
(BLAST)

001: MGCFPCSGDP SMTKRERKRI QANNQYKRDD QPNPKSDTLK ASENKVVKKE EPENANQSIT RMDGNCSSSI PRDGETDGIK INGVNRARAF KFNELVAATE
101: NFKAAYFLGE GGFGKVYKGF LADTGQVVAI KQLNPDGCQG NREFIVEVLT LSMADHPNLV KLIGYCVEGH HRVLVYEYMP LGSLEDHLHD PWSDKKRLDW
201: NTRMMIAAGA ARGLEYLHDK MKPPVIYRDL KGSNILLGEG YHPKLSDFGL AKVGPLGDKT HVSTRVMGTY GYCAPDYAMT GQLTFKSDIY SFGVVLLEII
301: TGRKAIDNTR SATEQNLVAW ARPLFKDRKK FHQMADPVLE GHYPVRGLYQ ALAIAAMCVQ EQPNMRPLIA DIVTALNYLA SQKYDPEAQP PQRSRKNSSS
401: RKSRSIDDQN TPINVEGHNR TRSIDDQKCP INIEGHNRTR SIDDQKSPII VERHNRTNSE GLS

Best Arabidopsis Sequence Match ( AT1G07870.2 )
(BLAST)

001: MGCFGCSKKS SKRSETNKDT VINRKIVGGT TSVAKSDKRD DQTQPSSDST KVSPYRDVNN EGGVGKEDQL SLDVKGLNLN DQVTGKKAQT FTFQELAEAT
101: GNFRSDCFLG EGGFGKVFKG TIEKLDQVVA IKQLDRNGVQ GIREFVVEVL TLSLADHPNL VKLIGFCAEG DQRLLVYEYM PQGSLEDHLH VLPSGKKPLD
201: WNTRMKIAAG AARGLEYLHD RMTPPVIYRD LKCSNILLGE DYQPKLSDFG LAKVGPSGDK THVSTRVMGT YGYCAPDYAM TGQLTFKSDI YSFGVVLLEL
301: ITGRKAIDNT KTRKDQNLVG WARPLFKDRR NFPKMVDPLL QGQYPVRGLY QALAISAMCV QEQPTMRPVV SDVVLALNFL ASSKYDPNSP SSSSGKNPSF
401: HRDRDDEEKR PHLVKETECE GRTGNTRRGI FPVSEYWIHA IPVIVFLCFF TLWIFSHSVS VMNDGEIMSI HRLEKSMAVR NESHVSLAIL ASSAVSPASS
501: ALVAVVSTNQ NLTTFHNATQ SQQNATQSVN KAKQPHAV

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.