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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000486.1-P Field mustard cytosol 76.98 96.78
CDX83297 Canola cytosol 96.28 96.06
AT2G28590.1 Thale cress cytosol 76.98 78.07
CDX93611 Canola cytosol 67.91 73.18
CDY32811 Canola cytosol 70.23 71.73
CDX95117 Canola cytosol 70.23 71.23
CDY06282 Canola cytosol 69.07 70.38
CDY22717 Canola cytosol 68.84 66.97
KRH24971 Soybean cytosol 64.19 66.51
KRG88698 Soybean cytosol 63.72 65.87
CDY57665 Canola cytosol 40.93 61.32
VIT_06s0004g03670.t01 Wine grape cytosol, plastid 61.4 61.11
Os07t0695300-01 Rice cytosol, plastid 53.95 59.49
CDY55687 Canola plastid 51.63 59.2
Solyc06g075550.2.1 Tomato cytosol, nucleus 56.51 59.12
CDY04867 Canola plastid 51.63 59.04
PGSC0003DMT400016900 Potato cytosol 56.28 59.02
TraesCS2B01G096000.1 Wheat cytosol, plastid 53.95 57.43
EER97804 Sorghum cytosol 53.72 57.18
TraesCS2D01G079200.1 Wheat plastid 53.72 57.04
TraesCS2A01G081400.1 Wheat plastid 53.72 57.04
KRH22964 Soybean cytosol 62.56 56.63
KRH10353 Soybean cytosol 63.26 56.08
CDX82241 Canola cytosol 48.14 55.65
CDY19633 Canola cytosol, mitochondrion 47.67 55.56
CDY36035 Canola cytosol 47.91 55.38
CDY29433 Canola mitochondrion 47.44 54.99
CDY58830 Canola nucleus 70.0 53.94
PGSC0003DMT400065260 Potato cytosol 57.91 53.78
Solyc11g072660.1.1 Tomato cytosol 58.37 52.29
CDX96628 Canola cytosol 45.58 51.99
CDX88927 Canola cytosol 53.49 51.8
CDY55594 Canola plastid 43.72 51.65
CDY33638 Canola cytosol 45.35 51.59
CDY43074 Canola mitochondrion 43.49 51.52
CDY31493 Canola cytosol 44.88 51.33
CDY29515 Canola cytosol 44.88 50.66
CDX88266 Canola cytosol, nucleus, plastid 44.65 50.13
HORVU2Hr1G013440.2 Barley plastid 53.72 50.11
CDY03295 Canola cytosol 43.95 50.0
CDX85669 Canola cytosol 50.0 49.77
CDY39784 Canola cytosol, plastid 43.72 49.74
CDX91145 Canola cytosol 50.0 49.65
CDX68101 Canola cytosol 43.72 49.34
CDX85945 Canola cytosol 43.72 49.34
CDX92596 Canola plastid 53.72 48.84
CDX70830 Canola cytosol 53.02 48.72
CDY65598 Canola cytosol 44.19 48.72
CDX87608 Canola cytosol 43.26 48.56
CDX78510 Canola cytosol 50.0 48.53
CDY24861 Canola cytosol, plastid 43.49 48.2
CDY25327 Canola cytosol, plastid 43.95 48.09
CDY47164 Canola cytosol, plastid 43.95 48.09
CDY13906 Canola plastid 53.95 47.93
CDX97232 Canola cytosol 50.47 47.69
CDX69664 Canola cytosol 50.47 47.69
CDY47330 Canola cytosol 41.16 46.46
CDY01117 Canola cytosol 40.93 46.19
CDY66752 Canola cytosol 45.81 45.29
CDY07261 Canola cytosol, plastid 26.98 45.14
CDY34917 Canola cytosol 45.81 44.47
CDY05311 Canola cytosol 45.58 44.44
CDY08017 Canola cytosol 45.58 44.34
CDX74065 Canola cytosol 45.58 44.34
CDY53627 Canola cytosol 50.23 43.9
CDY51533 Canola cytosol 43.26 33.76
CDY28710 Canola cytosol 42.09 32.73
CDX74234 Canola cytosol 42.79 32.39
CDX92014 Canola cytosol 42.79 32.34
CDX78694 Canola cytosol 40.47 30.21
CDX70697 Canola cytosol 40.47 29.74
CDY55581 Canola cytosol 40.0 29.35
CDX69447 Canola cytosol 40.0 29.01
CDY07262 Canola cytosol 3.49 25.42
CDY24650 Canola mitochondrion 45.35 16.35
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078E345EnsemblPlants:CDX95766ProteinID:CDX95766
ProteinID:CDX95766.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00101681001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF63InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEC5C0:::::
Description
BnaC03g26470D
Coordinates
chrLK031890:-:1296721..1298639
Molecular Weight (calculated)
47924.3 Da
IEP (calculated)
6.597
GRAVY (calculated)
-0.452
Length
430 amino acids
Sequence
(BLAST)
001: MGCFGRTGKS SKRSETKKKN NDFAKHNKLE IDANCVRKSA DRDSQTQPNL EGSPCGDDVN KEVPSEEDQF SLDAKDSNVE DEVSGKRAMT FTFEELSVST
101: GNFRSDCLLG EGGFGKVYKG LIERINQVVA IKQLDRNGAQ GIREFVVEVM TLSLADHPNL VKLIGFCAQG VQRLLVYEYM PLGSLEDHLH DLPNGKTPLS
201: WNNRMKIAAG AARGLEYLHD TMKPPVIYRD LKCSNILLGE DYHPKLSDFG LAKVGPSGDA THVSTRVMGT YGYCAPEYAM TGQLTFKSDI FSFGVVLLEL
301: ITGMKAIYKT KARKDQTLVG WARPLFKDRK NFKNMVDPLM EGDYPVRGLY QALAIAAMCV QDQPGMRPVI SDVVMALDHL ASCNYDATHR DKQTNVIETR
401: VDNEEKRVTE SKFCMEEEKQ EIKICSAQAN
Best Arabidopsis Sequence Match ( AT2G28590.1 )
(BLAST)
001: MGCFGRTPKS NKRSDTKTTK NNDFTPKKLT VNANRDKLTQ PSSDCLKVSI CGDVSKEIVT KKDQLALDAK DTNVEDEVIV KKAQTFTFEE LSVSTGNFKS
101: DCFLGEGGFG KVYKGFIEKI NQVVAIKQLD RNGAQGIREF VVEVLTLSLA DHPNLVKLIG FCAEGVQRLL VYEYMPLGSL DNHLHDLPSG KNPLAWNTRM
201: KIAAGAARGL EYLHDTMKPP VIYRDLKCSN ILIDEGYHAK LSDFGLAKVG PRGSETHVST RVMGTYGYCA PDYALTGQLT FKSDVYSFGV VLLELITGRK
301: AYDNTRTRNH QSLVEWANPL FKDRKNFKKM VDPLLEGDYP VRGLYQALAI AAMCVQEQPS MRPVIADVVM ALDHLASSKY DRSHRQKQDN VTETKVDEEK
401: TLTTESNVCV EEKQEIKICS DQAT
Arabidopsis Description
PBL6Probable serine/threonine-protein kinase PBL6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.