CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05138	plasma membrane
EES07310
EES10653	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	EES07310	AT1G71020.1	21798944
AT5G13160.1	EES05138	AT5G13160.1	24225654
AT5G13160.1	EES10653	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050575_P001	Maize	cytosol	96.29	95.17
Zm00001d016591_P002	Maize	cytosol	93.36	93.91
Os02t0513000-01	Rice	plasma membrane	91.6	89.16
EES10653	Sorghum	cytosol	73.05	77.27
GSMUA_Achr5P25020_001	Banana	cytosol	61.72	74.18
CDX85669	Canola	cytosol	61.13	72.45
CDX91145	Canola	cytosol	61.13	72.29
VIT_01s0146g00250.t01	Wine grape	cytosol	65.43	72.2
KRH36361	Soybean	cytosol	64.26	71.52
Bra023393.1-P	Field mustard	cytosol	62.89	71.4
CDX69664	Canola	cytosol	63.09	70.99
CDX97232	Canola	cytosol	63.09	70.99
Bra008851.1-P	Field mustard	cytosol	63.09	70.99
AT5G13160.1	Thale cress	cytosol	62.89	70.61
KRG93133	Soybean	cytosol	64.26	70.6
KRH46858	Soybean	cytosol	64.45	70.36
Solyc05g024290.2.1	Tomato	cytosol	63.87	70.32
PGSC0003DMT400021929	Potato	cytosol	63.28	69.23
Bra006184.1-P	Field mustard	cytosol	59.77	69.23
CDX78510	Canola	cytosol	59.77	69.07
EER97804	Sorghum	cytosol	50.98	64.6
CDY53627	Canola	cytosol	60.16	62.6
EES18123	Sorghum	plastid	57.03	61.6
EES18122	Sorghum	plastid	57.03	61.6
EER99879	Sorghum	plastid	54.49	60.65
EER95576	Sorghum	cytosol	39.06	53.05
EES00508	Sorghum	cytosol	47.46	52.83
EES17638	Sorghum	peroxisome, plastid	45.51	52.13
EES01588	Sorghum	plastid	43.95	49.56
EER96397	Sorghum	cytosol	41.02	49.3
KXG39633	Sorghum	plastid	36.52	46.75
EES19660	Sorghum	cytosol	38.09	45.56
EES19760	Sorghum	plastid	44.73	45.53
OQU86038	Sorghum	plastid	36.91	41.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EntrezGene:8056791	UniProt:C5XSN6
EnsemblPlants:EES05138	ProteinID:EES05138	ProteinID:EES05138.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF287	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3004G157000	SUPFAM:SSF56112	unigene:Sbi.20763
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8566C	RefSeq:XP_002452162.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:49807724..49813133

Molecular Weight (calculated)

55981.4 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.525

Length

512 amino acids

Sequence
(BLAST)

001: MGCFSCFDSP ADEQLNPKFG GAGGYGGGTS AAAAAYGAGA GAGVGRHGGR GGYPDLQQAP MAAPRVEKFS AAAEKARVKS NVLTKEASVP KDANGNAISA
101: QTFTFRELAT ATRNFRPECF LGEGGFGRVY KGRLESTGQV VAIKQLNRDG LQGNREFLVE VLMLSLLHHQ NLVNLIGYCA DGDQRLLVYE YMPSGSLEDH
201: LHDLPLDKEA LDWNTRMKIA AGAAKGLEYL HDKANPPVIY RDFKSSNILL DESFHPKLSD FGLAKLGPVG DKSHVSTRVM GTYGYCAPEY AMTGQLTVKS
301: DVYSFGVVLL ELITGRRAID STRPHGEQNL VSWARPLFND RRKLPKMADP RLEGRYPMRG LYQALAVASM CIQSEAASRP LIADVVTALS YLASQQYDPN
401: TALASRKPGG DQRSRPGENG RVVSRNDETG SSGHKSPGKD REDSPRDLPA ILNKDLERER MVAEAKMWGD RERMVAEAKM WGDRERMVAE AKMWGENWRD
501: KRRAENGQGS LD

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.