CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022492_P002	Maize	plastid	93.48	92.87
Os07t0668900-01	Rice	plasma membrane	85.43	82.05
Zm00001d016176_P001	Maize	cytosol	70.0	81.31
TraesCS2B01G137800.2	Wheat	plastid	80.87	79.66
TraesCS2D01G117200.2	Wheat	plastid	80.87	79.66
HORVU2Hr1G020340.11	Barley	plastid	81.52	79.62
TraesCS2A01G117800.2	Wheat	plastid	80.65	79.44
EER97804	Sorghum	cytosol	56.74	64.6
EES18122	Sorghum	plastid	65.65	63.71
EES18123	Sorghum	plastid	65.65	63.71
EES10653	Sorghum	cytosol	59.78	56.82
EES05138	Sorghum	cytosol	60.65	54.49
EES00508	Sorghum	cytosol	53.04	53.04
EER95576	Sorghum	cytosol	42.61	51.99
EES17638	Sorghum	peroxisome, plastid	48.91	50.34
EES01588	Sorghum	plastid	49.57	50.22
EER96397	Sorghum	cytosol	46.09	49.77
EES19660	Sorghum	cytosol	42.39	45.56
KXG39633	Sorghum	plastid	39.35	45.25
EES19760	Sorghum	plastid	49.35	45.13
OQU86038	Sorghum	plastid	40.0	40.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EntrezGene:8078517	UniProt:C5X4W1
EnsemblPlants:EER99879	ProteinID:EER99879	ProteinID:EER99879.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF87	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3002G409600	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A847D4	RefSeq:XP_002463358.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:75803535..75808571

Molecular Weight (calculated)

50119.9 Da

IEP (calculated)

9.528

GRAVY (calculated)

-0.424

Length

460 amino acids

Sequence
(BLAST)

001: MSCLPCSGSS GKEAKSLAAL SPTPRPAAKA APVRSNSRAS GSKKEDSVPV RRGGNIPHGP AQIFTFRELA IATKNFRKDC LLGEGGFGRV YKGRMENGQV
101: IAVKQLDRNG FQGNREFLVE VLMLSLLHHP NLVRLIGYCA DGDQRLLVYE YMLLGSLENH LFGPPDKEPL DWNTRMKIAA GAAKGLEYLH DKANPPVIYR
201: DFKSSNILLG EDYYPKLSDF GLAKLGPVGD KTHVSTRVMG TYGYCAPEYA MTGQLTLKSD VYSFGVVFLE LITGRKAIDH TQPSGEQNLV AWARPLFRDR
301: RKFCQLADPS LQGRYPKRGL YQALAVAAMC LQEQAASRPL IGDVVTALSY LAAHPYDPNV PSTKDSRTCP STPRAKTHRR TTSVPDAQHA AESLMLNFPD
401: LRKETVRGGK FEKDGTEGSG SSSSSGRNDG LDVPQLLAGK ACSEGDNVQK STIKVGAREN

Best Arabidopsis Sequence Match ( AT5G18610.1 )
(BLAST)

001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND

Arabidopsis Description

PBL27Serine/threonine-protein kinase PBL27 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.