CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043227_P002	Maize	mitochondrion	84.36	87.64
Zm00001d012600_P001	Maize	plastid	89.65	84.27
TraesCS3B01G355700.1	Wheat	plastid	68.06	69.59
TraesCS3A01G326400.1	Wheat	plastid	68.06	69.59
Os01t0789200-01	Rice	mitochondrion, plastid	71.37	69.38
TraesCS3D01G319800.1	Wheat	plastid	66.08	69.28
HORVU0Hr1G007070.2	Barley	cytosol	49.12	62.29
EES19760	Sorghum	plastid	63.44	57.26
GSMUA_Achr9P24960_001	Banana	cytosol	57.05	56.67
EER97804	Sorghum	cytosol	46.92	52.72
EER96397	Sorghum	cytosol	49.12	52.35
EER99879	Sorghum	plastid	50.22	49.57
EER95576	Sorghum	cytosol	40.53	48.81
GSMUA_Achr8P03680_001	Banana	cytosol	53.74	48.8
EES18123	Sorghum	plastid	50.88	48.73
EES18122	Sorghum	plastid	50.66	48.52
EES17638	Sorghum	peroxisome, plastid	45.59	46.31
EES00508	Sorghum	cytosol	46.7	46.09
EES10653	Sorghum	cytosol	48.46	45.45
EES05138	Sorghum	cytosol	49.56	43.95
KXG39633	Sorghum	plastid	37.44	42.5
EES19660	Sorghum	cytosol	37.44	39.72
OQU86038	Sorghum	plastid	40.09	39.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8082381	UniProt:C5XMC8	EnsemblPlants:EES01588
ProteinID:EES01588	ProteinID:EES01588.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF43
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G322000	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A8441A	RefSeq:XP_002456468.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:64922839..64924804

Molecular Weight (calculated)

49926.9 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.433

Length

454 amino acids

Sequence
(BLAST)

001: MGLFSSAAKR CSNGKKFLRS AGACCCSPSA SAPAGGVRGK EEASTSAPAS APADSKKKRW RKRKFWRKKK KAKKESGDGS GELADLVNNI SANSDVCKNV
101: NAAEEILRGS NQNMPSRALT FSQLSAATDG FSEQNLLGEG GFGRVYKGLL EDTKEVIAVK QLDRNGFQGN REFLVEVLML SLLHHPNLVK LLGYSTDSDQ
201: RILVYEYMPK GSLEDHLLDL PPNWKPLPWH TRMQIAVGAA KGIEYLHEVA NPPVIYRDLK ASNILLDRDF NAKLSDFGLA KLGPMGDQSH VSTRVMGTYG
301: YCAPEYAMTG KLTKMSDIYS FGVVLLELIT GRRAIDVARP SEEQVLVHWA SPLLRDKRRF MKLADPLLCR RYPVKGLYQA LAVASMCLQE DAASRPGISD
401: VVAALSFLAD PQNYPPEGMQ AEHYKSPDRG SDKDSSPSPP KADMIRADDE MKHR

Best Arabidopsis Sequence Match ( AT3G20530.1 )
(BLAST)

001: MKINCLFCCM SHRRFNRRSS SRQSIKDCID AKNNITTFDN ISFKTDSSRR RYISEEIAKL GKGNISAHIF TFRELCVATK NFNPDNQLGE GGFGRVYKGQ
101: IETPEQVVAV KQLDRNGYQG NREFLVEVMM LSLLHHQNLV NLVGYCADGD QRILVYEYMQ NGSLEDHLLE LARNKKKPLD WDTRMKVAAG AARGLEYLHE
201: TADPPVIYRD FKASNILLDE EFNPKLSDFG LAKVGPTGGE THVSTRVMGT YGYCAPEYAL TGQLTVKSDV YSFGVVFLEM ITGRRVIDTT KPTEEQNLVT
301: WASPLFKDRR KFTLMADPLL EGKYPIKGLY QALAVAAMCL QEEAATRPMM SDVVTALEYL AVTKTEEDGQ TVEGEEEEEE DERSKL

Arabidopsis Description

PBL23Probable serine/threonine-protein kinase PBL23 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.