Factsheet for Bra023393.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006184.1-P	plasma membrane
Bra008851.1-P	plasma membrane
Bra016165.1-P
Bra023393.1-P	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	Bra016165.1-P	AT1G71020.1	21798944
AT5G13160.1	Bra006184.1-P	AT5G13160.1	24225654
AT5G13160.1	Bra008851.1-P	AT5G13160.1	24225654
AT5G13160.1	Bra023393.1-P	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85669	Canola	cytosol	95.57	99.77
CDX91145	Canola	cytosol	95.34	99.31
AT5G13160.1	Thale cress	cytosol	93.35	92.32
Bra008851.1-P	Field mustard	cytosol	92.68	91.87
Bra006184.1-P	Field mustard	cytosol	85.37	87.1
KRH36361	Soybean	cytosol	76.94	75.43
VIT_01s0146g00250.t01	Wine grape	cytosol	77.61	75.43
Solyc05g024290.2.1	Tomato	cytosol	77.16	74.84
KRH46858	Soybean	cytosol	77.61	74.63
PGSC0003DMT400021929	Potato	cytosol	76.72	73.93
KRG93133	Soybean	cytosol	76.27	73.82
GSMUA_Achr5P25020_001	Banana	cytosol	69.62	73.71
GSMUA_Achr9P01200_001	Banana	cytosol	44.12	70.07
Os04t0393900-01	Rice	plasma membrane	67.18	66.74
GSMUA_Achr9P29230_001	Banana	cytosol	63.86	66.51
TraesCS2B01G302800.1	Wheat	cytosol, plastid	69.18	65.96
TraesCS2D01G284200.1	Wheat	cytosol	69.18	65.55
Bra028862.1-P	Field mustard	plastid	54.55	65.43
HORVU2Hr1G070690.2	Barley	cytosol	69.4	65.34
TraesCS2A01G285700.1	Wheat	cytosol, plastid	68.96	65.34
EES10653	Sorghum	cytosol	69.84	65.08
Zm00001d003925_P001	Maize	cytosol, nucleus, plastid	69.84	64.81
Bra023944.1-P	Field mustard	cytosol	50.33	64.49
GSMUA_Achr6P20850_001	Banana	cytosol	64.75	62.93
EES05138	Sorghum	cytosol	71.4	62.89
Zm00001d016591_P002	Maize	cytosol	70.95	62.87
Zm00001d050575_P001	Maize	cytosol	71.84	62.55
Bra001791.1-P	Field mustard	cytosol	49.89	61.98
Bra036670.1-P	Field mustard	cytosol	51.66	61.64
Os02t0513000-01	Rice	plasma membrane	71.62	61.41
Bra000486.1-P	Field mustard	cytosol	46.12	60.82
Bra016457.1-P	Field mustard	cytosol	48.12	57.56
Bra021308.1-P	Field mustard	cytosol, plastid	48.56	56.44
Bra025835.1-P	Field mustard	cytosol	47.67	56.43
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	46.12	55.91
Bra002172.1-P	Field mustard	plastid	68.51	55.88
Bra018678.1-P	Field mustard	cytosol	51.66	55.74
Bra031596.1-P	Field mustard	cytosol	51.66	55.08
Bra030705.1-P	Field mustard	cytosol	50.33	54.44
Bra032694.1-P	Field mustard	cytosol	45.9	53.91
Bra040358.1-P	Field mustard	cytosol	52.33	53.27
Bra001233.1-P	Field mustard	cytosol	52.11	53.17
Bra015756.1-P	Field mustard	cytosol	44.79	52.74
Bra003723.1-P	Field mustard	cytosol	37.69	52.15
Bra006469.1-P	Field mustard	cytosol	68.74	50.41
Bra040602.1-P	Field mustard	cytosol	48.12	39.24
Bra001065.1-P	Field mustard	cytosol	46.12	36.62
Bra006358.1-P	Field mustard	cytosol	44.12	34.55
Bra008617.1-P	Field mustard	cytosol	45.23	34.46
Bra029618.1-P	Field mustard	mitochondrion	52.77	19.97

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra023393	EnsemblPlants:Bra023393.1
EnsemblPlants:Bra023393.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4E3P0	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF491	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002543477	:	:	:	:	:

Description

AT5G13160 (E=2e-243) PBS1 | PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase

Coordinates

chrA02:+:3164851..3167239

Molecular Weight (calculated)

49491.5 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.479

Length

451 amino acids

Sequence
(BLAST)

001: MGCFSCFDSS DDETLNPAAE ESSKTQKQSQ PTVSNSLSAL PSGGEKLNSN SKSNGGAKTE LLLPRDGLGQ IAAHTFTFRE LAAATMNFHP DTFLGEGGFG
101: RVYKGRLDST GQVVAVKQLD RNGLQGNREF LVEVLMLSLL HHPNLVNLIG YCADGDQRLL VYEFMSLGSL EDHLHDLPPD KEALDWNMRM KIAAGAAKGL
201: EFLHDKANPP VIYRDFKSSN ILLDEGFHPK LSDFGLAKLG PTGDKSHVST RVMGTYGYCA PEYAMTGQLT VKSDVYSFGV VFLELITGRK AIDTDMPHGE
301: QNLVAWARPL FNDRRKFIKL ADPKLKGRFP TRALYQALAV ASMCIQGEAA TRPLIADVVT ALSYLANQGY DPNKNERGAR LITRNDEGGG SGSKFDLEGS
401: EKEDSPRETA RMLNRDINRE RAVAEAKMWG ESLREKRRQS EQGTSESNST G

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.