Factsheet for Bra008617.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69447	Canola	cytosol	98.65	98.48
CDY55581	Canola	cytosol	96.45	97.44
Bra006358.1-P	Field mustard	cytosol	72.97	75.0
AT5G16500.1	Thale cress	cytosol	80.41	74.84
Bra040602.1-P	Field mustard	cytosol	58.11	62.21
Bra001065.1-P	Field mustard	cytosol	58.95	61.44
Bra036670.1-P	Field mustard	cytosol	35.14	55.03
GSMUA_Achr5P29320_001	Banana	cytosol	33.45	54.25
GSMUA_Achr6P15570_001	Banana	cytosol	33.78	52.36
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	30.41	52.17
GSMUA_Achr8P02730_001	Banana	cytosol	32.6	51.74
Bra028862.1-P	Field mustard	plastid	32.26	50.8
Bra032694.1-P	Field mustard	cytosol	32.43	50.0
Bra023944.1-P	Field mustard	cytosol	29.73	50.0
Bra001791.1-P	Field mustard	cytosol	30.41	49.59
Bra000486.1-P	Field mustard	cytosol	28.21	48.83
GSMUA_Achr10P...	Banana	cytosol, plastid	34.63	48.12
Bra016457.1-P	Field mustard	cytosol	30.41	47.75
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	37.16	47.62
Bra040358.1-P	Field mustard	cytosol	35.3	47.18
Bra001233.1-P	Field mustard	cytosol	34.97	46.83
TraesCS3D01G543300.1	Wheat	cytosol	31.25	46.48
Bra025835.1-P	Field mustard	cytosol	29.9	46.46
Bra003723.1-P	Field mustard	cytosol	25.34	46.01
HORVU3Hr1G117850.1	Barley	cytosol	30.74	45.5
Bra018678.1-P	Field mustard	cytosol	32.09	45.45
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	33.11	45.27
TraesCS3B01G603300.1	Wheat	cytosol, plastid	31.42	45.26
Bra023393.1-P	Field mustard	cytosol	34.46	45.23
TraesCS3A01G537900.1	Wheat	cytosol	31.25	45.12
Bra030705.1-P	Field mustard	cytosol	31.59	44.84
Bra031596.1-P	Field mustard	cytosol	31.93	44.68
Bra021308.1-P	Field mustard	cytosol, plastid	29.22	44.59
Bra008851.1-P	Field mustard	cytosol	34.12	44.4
Bra015756.1-P	Field mustard	cytosol	28.72	44.39
Bra028381.1-P	Field mustard	cytosol, nucleus, plastid	27.7	44.09
Bra006184.1-P	Field mustard	cytosol	32.77	43.89
TraesCS1D01G067700.1	Wheat	plastid	31.93	42.19
EES17638	Sorghum	peroxisome, plastid	31.76	42.06
TraesCS1B01G085000.1	Wheat	plastid	31.76	42.06
HORVU1Hr1G013840.1	Barley	mitochondrion	31.59	42.02
Solyc05g055860.2.1	Tomato	cytosol	34.46	41.98
KRH68843	Soybean	cytosol	41.05	41.9
Os05t0125400-00	Rice	cytosol	31.08	41.82
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	31.42	41.52
Solyc04g050970.2.1	Tomato	plastid	38.68	40.82
PGSC0003DMT400060019	Potato	cytosol	34.46	40.72
KRG97093	Soybean	cytosol	40.71	40.57
PGSC0003DMT400031291	Potato	cytosol	38.34	40.54
Zm00001d041938_P001	Maize	plastid	31.76	39.41
Bra002172.1-P	Field mustard	plastid	34.97	37.43
KRG92591	Soybean	cytosol	38.68	37.0
KRH34195	Soybean	cytosol	38.68	36.41
Bra006469.1-P	Field mustard	cytosol	34.97	33.66
Bra029618.1-P	Field mustard	mitochondrion	35.81	17.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra008617	EnsemblPlants:Bra008617.1	EnsemblPlants:Bra008617.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CWM0	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544A4F	SEG:seg

Description

AT5G16500 (E=6e-202) | protein kinase family protein

Coordinates

chrA10:+:13111194..13113895

Molecular Weight (calculated)

66749.2 Da

IEP (calculated)

4.417

GRAVY (calculated)

-0.894

Length

592 amino acids

Sequence
(BLAST)

001: MNCFPCFNSQ RNRNLSCKNG VNEHDDHDFR PPVATTKHIE ERETEQTPLK TFNFRELAMA TKNFRQECLI GEGGFGRVYK GTLQSTGQVV AVKQLDKHGL
101: HGNKEFQAQV LSLAKLQHPN LVKLIGYCAD GDQRLLVYEY FSSVSLQDHL YEHKPSHKHM DWITRMKIAF GAAEGLDYLH DKVNPPVIYR DLKASNVLLD
201: DEFYPRLCDF GLQILSPGAG DSLFLSSRVM DTYGYSAPEY TRGDEVTIKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFRD PTRYPDMADP
301: LLRKKFSERG LNQAVAITSM CLQDEPSARP LISDVMVALS FLSMSTDGIP TAVPVSSFRD KSMSIALSRH GSCSVVPFSL PRKEEDDASS VSSSDSEDEE
401: EQEEESRSMK KQDEETNGND SEDESDSNSE KDQEEEQDSP QLEKARSSSS SSDSGSERRR SIEETNATAQ SLKIKYGYSS EEEDNERLSS KSSFKSNGES
501: LLSLRFDSER NHNDSSNNTS MRVNSLAHDD DDEEEEEEEE EENHETRLEH THSSKSEVQS IYSDDNTCEG SGDSSLRRVE PEEEDHDSSD QE

Best Arabidopsis Sequence Match ( AT5G16500.1 )
(BLAST)

001: MIIMMNCFPC FTSQKSRNAP CTTNETNDDN VEHDEFRPPV VATTKRTEER EPAEQQPPVK TFNFRELATA TKNFRQECLL GEGGFGRVYK GTLQSTGQLV
101: AVKQLDKHGL HGNKEFLAEV LSLAKLEHPN LVKLIGYCAD GDQRLLVFEY VSGGSLQDHL YEQKPGQKPM DWITRMKIAF GAAQGLDYLH DKVTPAVIYR
201: DLKASNILLD AEFYPKLCDF GLHNLEPGTG DSLFLSSRVM DTYGYSAPEY TRGDDLTVKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFKD
301: PKRYPDMADP LLRKNFSERG LNQAVAITSM CLQEEPTARP LISDVMVALS FLSMSTEDGI PATVPMESFR DKSMSIALSR HGSCSVTPFC ISRKDVGNKS
401: SSSSDSEDEE EEKEQKAEKE EESTSKKRQE QEETATDSDD ESDSNSEKDQ EEEQSQLEKA RESSSSSSDS GSERRSIDET NATAQSLKIS YSNYSSEEED
501: NEKLSSKSSC KSNEESTFSR YDSGRDHDDS SRNTSMRINS LAHDDKEEDE EENHETRSYS DHDDSPRNTS MRINSLSHDD DEEEEEENHQ TRLEHIHSSK
601: SEDQSVYSDD DAGESGESSL HRIEAKEEEH ISSDHD

Arabidopsis Description

LIP1Receptor-like kinase LIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.