CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68843	Soybean	cytosol	89.56	91.72
GSMUA_Achr5P29320_001	Banana	cytosol	36.87	60.0
GSMUA_Achr8P02730_001	Banana	cytosol	35.69	56.84
GSMUA_Achr6P15570_001	Banana	cytosol	36.36	56.54
KRH51602	Soybean	cytosol, plastid	32.49	56.1
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	31.82	54.78
KRH60919	Soybean	cytosol	32.66	54.04
KRG95902	Soybean	cytosol	34.34	53.68
KRH67618	Soybean	cytosol	34.01	53.3
GSMUA_Achr10P...	Banana	cytosol, plastid	38.05	53.05
KRH46760	Soybean	cytosol	38.55	52.4
KRH14431	Soybean	cytosol	33.33	52.24
KRH19781	Soybean	cytosol	33.67	52.22
KRH73720	Soybean	plastid	33.16	51.98
KRH32375	Soybean	cytosol	33.5	51.96
KRH46122	Soybean	cytosol	35.19	50.73
KRH06009	Soybean	cytosol, plastid	29.97	49.86
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	38.38	49.35
KRG94631	Soybean	extracellular	33.84	48.55
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	35.35	48.5
KRH36361	Soybean	cytosol	37.54	48.48
EES17638	Sorghum	peroxisome, plastid	36.36	48.32
TraesCS3D01G543300.1	Wheat	cytosol	32.15	47.99
KRG93133	Soybean	cytosol	37.54	47.85
KRH46858	Soybean	cytosol	37.71	47.76
HORVU3Hr1G117850.1	Barley	cytosol	31.99	47.5
Bra040602.1-P	Field mustard	cytosol	43.94	47.2
CDY51533	Canola	cytosol	43.77	47.19
Os05t0125400-00	Rice	cytosol	34.68	46.82
AT3G02810.1	Thale cress	cytosol	43.94	46.77
TraesCS3B01G603300.1	Wheat	cytosol, plastid	32.32	46.72
CDY28710	Canola	cytosol	43.43	46.65
KRG88698	Soybean	cytosol	32.49	46.39
KRG99800	Soybean	cytosol	37.54	46.36
TraesCS3A01G537900.1	Wheat	cytosol	31.99	46.34
KRH24971	Soybean	cytosol	32.32	46.27
HORVU1Hr1G013840.1	Barley	mitochondrion	34.51	46.07
KRH11239	Soybean	cytosol, plastid	39.73	45.91
TraesCS1D01G067700.1	Wheat	plastid	34.51	45.76
KRH06889	Soybean	cytosol	32.66	45.75
KRH21034	Soybean	cytosol, plastid	39.39	45.61
TraesCS1B01G085000.1	Wheat	plastid	34.01	45.19
KRH11410	Soybean	plastid	29.63	45.13
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	34.01	45.09
Bra001065.1-P	Field mustard	cytosol	42.42	44.37
CDX92014	Canola	cytosol	42.42	44.29
Solyc05g055860.2.1	Tomato	cytosol	36.2	44.24
CDX74234	Canola	cytosol	42.26	44.19
KRG92591	Soybean	cytosol	45.62	43.78
PGSC0003DMT400060019	Potato	cytosol	36.87	43.71
CDX78694	Canola	cytosol	42.09	43.4
Bra006358.1-P	Field mustard	cytosol	42.09	43.4
KRH22964	Soybean	cytosol	34.18	42.74
CDX70697	Canola	cytosol	42.09	42.73
PGSC0003DMT400031291	Potato	cytosol	39.73	42.14
KRH20875	Soybean	cytosol, plastid	30.13	42.12
KRH34195	Soybean	cytosol	44.44	41.97
Solyc04g050970.2.1	Tomato	plastid	39.39	41.71
KRH10353	Soybean	cytosol	34.01	41.65
Zm00001d041938_P001	Maize	plastid	33.16	41.3
CDY55581	Canola	cytosol	40.74	41.3
CDX69447	Canola	cytosol	40.74	40.81
Bra008617.1-P	Field mustard	cytosol	40.57	40.71
AT5G16500.1	Thale cress	cytosol	41.92	39.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100790911	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02012176	EnsemblPlantsGene:GLYMA_19G251300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K7N083	EnsemblPlants:KRG97093	ProteinID:KRG97093	ProteinID:KRG97093.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233ECFC	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:49706323..49709645

Molecular Weight (calculated)

65492.7 Da

IEP (calculated)

8.077

GRAVY (calculated)

-0.807

Length

594 amino acids

Sequence
(BLAST)

001: MSCFPCFSKT KRTNSKREQQ GIIPQENFVT RTPPDVKKQK ADDPNQFDTS KIQAQNFTFR ELAIATKNFR QECLLGEGGF GRVYKGTIPA TGQVVAVKQL
101: DRNGVQGSKE FLVEVLMLSL LNHDNLVKLA GYCADGDQRL LVYEFLPGGC LEGRLLERKP DEPVLDWYSR MKIASNAAKG LWYLHDKANP SVIYRDLKSA
201: NILLDNDNNA KLSDYGLAKL AGKDKTNIVP TRVMGNYGYS APEYVRTGNL TLKSDVYSFG VVLLELITGR RAIDTTRPHD EQNLVSWAQP IFRDPKRYPD
301: MADPSLENNF PEKDLNQVVA IAAMCLQEET AARPLMSDVV TALSFLSTTP PEVVPAAKSA AAPENEAGSV KDRDSSSSDE GSSSEVEENV TAQNQVSAKY
401: QESEDASETE YDYYGNENQQ KYSPQDIKQN KEFYSKSSRK SSTRSKNGTA SSSYKSSSTS DSENESISTS NKTSRKSSRK NSNKKSSLSQ KSSKKSSLSQ
501: KSSKKSSVRI LSHKKSEDVS RSSNSSSSSS SGVSQDGGDL FDRSGSRPSE GNVSIGLISS ENSDNDSSIR SEERSSMHLD HTSSRSEEGS VYYR

Best Arabidopsis Sequence Match ( AT3G02810.1 )
(BLAST)

001: MHCFPCFSSP KNKKSSTTNE TNDNNEPKPD DRRRAEETEE IEQSEGTSLK IFTFRELATA TKNFRQECLL GEGGFGRVYK GTLKSTGQVV AVKQLDKHGL
101: HGNKEFQAEV LSLGQLDHPN LVKLIGYCAD GDQRLLVYDY ISGGSLQDHL HEPKADSDPM DWTTRMQIAY AAAQGLDYLH DKANPPVIYR DLKASNILLD
201: DDFSPKLSDF GLHKLGPGTG DKMMALSSRV MGTYGYSAPE YTRGGNLTLK SDVYSFGVVL LELITGRRAL DTTRPNDEQN LVSWAQPIFR DPKRYPDMAD
301: PVLENKFSER GLNQAVAIAS MCVQEEASAR PLISDVMVAL SFLSMPTEDG IPTTVPILSF KDKSMSIALS RHDSNLVSPP PELATEDDKS STSSGEESSL
401: ESEKESVSKN EYKKKHEEED SSMESDDESD SNSEHEKDQP PKPIDEKNQA QSLKIKYRYS WEDIDVNDER LSSKSSQKSN DESTSSRYDS DRDQDEKGKE
501: EEEEEEAEEK HTHIEHIDSS KTDDDQSVYF DNDDDSGDDN GGSLHRIKSD VAIDSIKE

Arabidopsis Description

LIP2Receptor-like kinase LIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8S2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.