CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60919	Soybean	cytosol	96.51	92.48
KRH06009	Soybean	cytosol, plastid	72.97	70.31
VIT_18s0122g01240.t01	Wine grape	cytosol	77.03	66.08
PGSC0003DMT400025866	Potato	cytosol	69.77	64.86
Solyc04g082510.2.1	Tomato	plastid	69.19	64.32
GSMUA_Achr4P25510_001	Banana	cytosol	47.67	63.32
CDY31493	Canola	cytosol	68.9	63.03
Bra016457.1-P	Field mustard	cytosol	68.9	62.86
CDX96628	Canola	cytosol	68.9	62.86
Bra025835.1-P	Field mustard	cytosol	69.48	62.73
AT1G20650.1	Thale cress	cytosol	69.48	62.73
CDY33638	Canola	cytosol	68.9	62.7
CDY29515	Canola	cytosol	69.19	62.47
GSMUA_AchrUn_...	Banana	cytosol	61.92	59.5
CDX88266	Canola	cytosol, nucleus, plastid	64.53	57.96
CDX68101	Canola	cytosol	63.66	57.48
Bra003723.1-P	Field mustard	cytosol	54.36	57.36
AT1G76370.1	Thale cress	cytosol	63.37	57.22
CDX85945	Canola	cytosol	63.08	56.96
GSMUA_Achr1P02780_001	Banana	cytosol	62.21	56.76
CDX87608	Canola	cytosol	63.08	56.66
Bra015756.1-P	Field mustard	cytosol	62.79	56.4
GSMUA_Achr9P23970_001	Banana	cytosol	61.63	56.38
Solyc12g094680.1.1	Tomato	cytosol	65.41	56.25
KRH67618	Soybean	cytosol	61.63	55.94
KRG95902	Soybean	cytosol	61.63	55.79
KRH32375	Soybean	cytosol	61.63	55.35
KRH19781	Soybean	cytosol	61.63	55.35
KRH14431	Soybean	cytosol	59.3	53.83
KRH73720	Soybean	plastid	58.72	53.3
Zm00001d048341_P001	Maize	cytosol	55.23	50.8
Zm00001d027508_P002	Maize	cytosol	55.52	50.8
EER95576	Sorghum	cytosol	55.52	50.66
Os03t0130900-01	Rice	cytosol	56.1	50.66
KRH24971	Soybean	cytosol	59.59	49.4
KRG88698	Soybean	cytosol	59.01	48.8
TraesCS6A01G206300.2	Wheat	mitochondrion, plastid	55.52	48.72
TraesCS5A01G497600.2	Wheat	mitochondrion, plastid	55.52	48.72
KRH46760	Soybean	cytosol	61.63	48.51
KRH46122	Soybean	cytosol	57.56	48.06
KRH36361	Soybean	cytosol	63.95	47.83
HORVU4Hr1G082140.1	Barley	plasma membrane	47.97	47.55
KRG93133	Soybean	cytosol	64.24	47.42
Os02t0833000-01	Rice	plasma membrane	50.58	47.28
KRH46858	Soybean	cytosol	63.37	46.48
KRH11410	Soybean	plastid	52.62	46.41
KRG94631	Soybean	extracellular	54.36	45.17
TraesCS4D01G322200.3	Wheat	plastid	56.4	45.01
KRH06889	Soybean	cytosol	54.65	44.34
KRH11239	Soybean	cytosol, plastid	65.7	43.97
KRH21034	Soybean	cytosol, plastid	65.41	43.86
KRH20875	Soybean	cytosol, plastid	53.78	43.53
KRG99800	Soybean	cytosol	59.88	42.83
TraesCS6B01G470200.1	Wheat	mitochondrion, plastid	48.26	42.78
KRH22964	Soybean	cytosol	56.98	41.26
KRH10353	Soybean	cytosol	57.56	40.82
GSMUA_Achr11P...	Banana	plastid	50.0	40.28
HORVU6Hr1G095300.1	Barley	plastid	47.97	39.76
OQU86038	Sorghum	plastid	48.84	36.6
KRH68843	Soybean	cytosol	56.4	33.45
KRG97093	Soybean	cytosol	56.1	32.49
KRG92591	Soybean	cytosol	50.87	28.27
KRH34195	Soybean	cytosol	50.58	27.66
GSMUA_Achr11P...	Banana	nucleus	63.66	15.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100796595	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02003381	UniProt:C6ZRQ2
EMBL:FJ014742	EnsemblPlantsGene:GLYMA_06G017500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
EnsemblPlants:KRH51602	ProteinID:KRH51602	ProteinID:KRH51602.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001B06FD3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:1290486..1294559

Molecular Weight (calculated)

38285.0 Da

IEP (calculated)

8.268

GRAVY (calculated)

-0.247

Length

344 amino acids

Sequence
(BLAST)

001: MSCFSCFVSR GKDVRRVEID NGSRSATSSS EGKGKKSVSN KGTSTAAASF GFRELAEATR GFKEVNLLGE GGFGRVYKGR LSTGEYVAVK QLIHDGRQGF
101: HEFVTEVLML SLLHDSNLVK LIGYCTDGDQ RLLVYEYMPM GSLEDHLFDP HPDKEPLSWS TRMKIAVGAA RGLEYLHCKA DPPVIYRDLK SANILLDNEF
201: NPKLSDFGLA KLGPVGDNTH VSTRVMGTYG YCAPEYAMSG KLTLKSDIYS FGVLLLELIT GRRAIDTNRR PGEQNLVSWS RQFFSDRKKF VQMIDPLLQE
301: NFPLRCLNQA MAITAMCIQE QPKFRPLIGD IVVALEYLAS HSNP

Best Arabidopsis Sequence Match ( AT1G20650.1 )
(BLAST)

001: MTCCFSCLNP RTKDIRVDID NARCNSRYQT DSSVHGSDTT GTESISGILV NGKVNSPIPG GGARSFTFKE LAAATRNFRE VNLLGEGGFG RVYKGRLDSG
101: QVVAIKQLNP DGLQGNREFI VEVLMLSLLH HPNLVTLIGY CTSGDQRLLV YEYMPMGSLE DHLFDLESNQ EPLSWNTRMK IAVGAARGIE YLHCTANPPV
201: IYRDLKSANI LLDKEFSPKL SDFGLAKLGP VGDRTHVSTR VMGTYGYCAP EYAMSGKLTV KSDIYCFGVV LLELITGRKA IDLGQKQGEQ NLVTWSRPYL
301: KDQKKFGHLV DPSLRGKYPR RCLNYAIAII AMCLNEEAHY RPFIGDIVVA LEYLAAQSRS HEARNVSSPS PEISRTPRRD L

Arabidopsis Description

PBL21ASG5 [Source:UniProtKB/TrEMBL;Acc:A0A178W8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.