Factsheet for TraesCS6B01G470200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G095300.1	Barley	plastid	89.69	83.86
Os02t0833000-01	Rice	plasma membrane	61.08	64.4
OQU86038	Sorghum	plastid	64.18	54.25
GSMUA_Achr9P23970_001	Banana	cytosol	48.45	50.0
KRH51602	Soybean	cytosol, plastid	42.78	48.26
VIT_03s0038g03810.t01	Wine grape	cytosol	44.33	47.12
KRH60919	Soybean	cytosol	43.04	46.52
AT1G20650.1	Thale cress	cytosol	45.36	46.19
CDY31493	Canola	cytosol	44.59	46.01
AT1G76370.1	Thale cress	cytosol	44.33	45.14
Bra025835.1-P	Field mustard	cytosol	44.33	45.14
Bra016457.1-P	Field mustard	cytosol	43.81	45.09
CDY33638	Canola	cytosol	43.81	44.97
CDY29515	Canola	cytosol	44.07	44.88
PGSC0003DMT400025866	Potato	cytosol	42.78	44.86
CDX96628	Canola	cytosol	43.56	44.83
TraesCS2B01G096000.1	Wheat	cytosol, plastid	46.65	44.8
Solyc04g082510.2.1	Tomato	plastid	42.27	44.32
KRH06009	Soybean	cytosol, plastid	40.46	43.98
CDX88266	Canola	cytosol, nucleus, plastid	43.04	43.6
CDX68101	Canola	cytosol	42.78	43.57
Bra003723.1-P	Field mustard	cytosol	36.6	43.56
CDX85945	Canola	cytosol	42.53	43.31
CDX87608	Canola	cytosol	42.53	43.08
TraesCS3B01G603300.1	Wheat	cytosol, plastid	45.62	43.07
VIT_18s0122g01240.t01	Wine grape	cytosol	44.33	42.89
Bra015756.1-P	Field mustard	cytosol	42.27	42.82
TraesCS4B01G198900.1	Wheat	plastid	40.21	42.28
Solyc12g094680.1.1	Tomato	cytosol	43.04	41.75
TraesCS2B01G302800.1	Wheat	cytosol, plastid	48.2	39.53
TraesCS3B01G355700.1	Wheat	plastid	44.33	38.74
TraesCS1B01G247100.1	Wheat	cytosol	46.65	38.35
TraesCS3B01G506600.1	Wheat	cytosol	46.91	38.0
TraesCS2B01G137800.2	Wheat	plastid	45.62	37.9
TraesCS1B01G085000.1	Wheat	plastid	43.56	37.81
TraesCS3B01G206500.1	Wheat	cytosol	45.1	37.72
TraesCS4B01G000300.1	Wheat	cytosol	43.3	36.92
TraesCS1B01G297300.1	Wheat	cytosol	35.82	32.71
TraesCS1B01G329700.1	Wheat	plastid	42.01	29.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF59	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G470200	EnsemblPlants:TraesCS6B01G470200.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:718475375..718476541

Molecular Weight (calculated)

41733.9 Da

IEP (calculated)

8.327

GRAVY (calculated)

-0.160

Length

388 amino acids

Sequence
(BLAST)

001: MPRLFSWAGH RLPSLPCVPC TGDAAGPSSP SSQAAETSMS LRRRGDGSGS VAGRAARKFT LEQLSAATDG FSASNLLGQG GFGRVYRCHL RLDGDDDDAG
101: GAMTAVAVKQ LCRGGAQGSH EFVVECAMLM TLRHPNLVSL VGYCAQAQER LLVYELLPRG SLDAHLFLPL SGDGDRPALE WDTRVKIAHG AARALRYLHE
201: AVSPPVIYRD LKPSNILLAD DFSAKLSDLG LARMGPSGDD THVSTRVMGT LGYCAPDYAL TGRLTVKSDV YSFGVVLLEL ITGRRAFDAD ADAGDERRLL
301: DWARPYLADV RKMYGRLADP ALRGRFPRRA LYQLAVVASL CLHDRPNLRP TMSDVTRAID HVASQPWQAA PAGAGADAAH HRAKSCQI

Best Arabidopsis Sequence Match ( AT1G07870.1 )
(BLAST)

001: MGCFGCSKKS SKRSETNKDT VINRKIVGGT TSVAKSDKRD DQTQPSSDST KVSPYRDVNN EGGVGKEDQL SLDVKGLNLN DQVTGKKAQT FTFQELAEAT
101: GNFRSDCFLG EGGFGKVFKG TIEKLDQVVA IKQLDRNGVQ GIREFVVEVL TLSLADHPNL VKLIGFCAEG DQRLLVYEYM PQGSLEDHLH VLPSGKKPLD
201: WNTRMKIAAG AARGLEYLHD RMTPPVIYRD LKCSNILLGE DYQPKLSDFG LAKVGPSGDK THVSTRVMGT YGYCAPDYAM TGQLTFKSDI YSFGVVLLEL
301: ITGRKAIDNT KTRKDQNLVG WARPLFKDRR NFPKMVDPLL QGQYPVRGLY QALAISAMCV QEQPTMRPVV SDVVLALNFL ASSKYDPNSP SSSSGKNPSF
401: HRDRDDEEKR PHLVKETECE GSS

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.