Factsheet for VIT_18s0122g01240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51602	Soybean	cytosol, plastid	66.08	77.03
KRH60919	Soybean	cytosol	67.33	75.21
KRH06009	Soybean	cytosol, plastid	63.34	71.15
VIT_03s0038g03810.t01	Wine grape	cytosol	63.59	69.86
Bra016457.1-P	Field mustard	cytosol	64.84	68.97
CDY33638	Canola	cytosol	64.84	68.78
CDX96628	Canola	cytosol	64.59	68.7
AT1G20650.1	Thale cress	cytosol	65.09	68.5
Bra025835.1-P	Field mustard	cytosol	64.84	68.24
Solyc04g082510.2.1	Tomato	plastid	62.84	68.11
PGSC0003DMT400025866	Potato	cytosol	62.84	68.11
CDY31493	Canola	cytosol	63.59	67.82
CDY29515	Canola	cytosol	64.34	67.72
GSMUA_Achr4P25510_001	Banana	cytosol	41.9	64.86
CDX88266	Canola	cytosol, nucleus, plastid	61.1	63.97
AT1G76370.1	Thale cress	cytosol	60.6	63.78
Solyc12g094680.1.1	Tomato	cytosol	63.09	63.25
CDX87608	Canola	cytosol	59.85	62.66
Bra015756.1-P	Field mustard	cytosol	59.6	62.4
GSMUA_AchrUn_...	Banana	cytosol	55.61	62.29
CDX68101	Canola	cytosol	58.6	61.68
Bra003723.1-P	Field mustard	cytosol	50.12	61.66
VIT_13s0067g03410.t01	Wine grape	cytosol	57.61	61.44
CDX85945	Canola	cytosol	58.1	61.15
GSMUA_Achr1P02780_001	Banana	cytosol	57.36	61.01
GSMUA_Achr9P23970_001	Banana	cytosol	57.11	60.9
VIT_19s0090g00030.t01	Wine grape	mitochondrion	50.37	57.39
VIT_08s0040g03060.t01	Wine grape	nucleus	55.36	56.06
VIT_10s0116g00850.t01	Wine grape	cytosol	50.62	55.92
EER95576	Sorghum	cytosol	48.88	51.99
Zm00001d048341_P001	Maize	cytosol	48.38	51.87
Zm00001d027508_P002	Maize	cytosol	48.63	51.86
Os03t0130900-01	Rice	cytosol	49.13	51.71
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	54.36	50.46
TraesCS5A01G497600.2	Wheat	mitochondrion, plastid	48.38	49.49
Os02t0833000-01	Rice	plasma membrane	45.39	49.46
TraesCS6A01G206300.2	Wheat	mitochondrion, plastid	48.13	49.23
VIT_07s0005g06450.t01	Wine grape	plastid	52.12	48.95
VIT_01s0146g00250.t01	Wine grape	cytosol	56.36	48.71
VIT_19s0014g00940.t01	Wine grape	cytosol, plastid	51.87	48.6
HORVU4Hr1G082140.1	Barley	plasma membrane	40.9	47.26
VIT_14s0068g01540.t01	Wine grape	cytosol	49.13	46.68
TraesCS4D01G322200.3	Wheat	plastid	48.38	45.01
TraesCS6B01G470200.1	Wheat	mitochondrion, plastid	42.89	44.33
VIT_05s0020g01770.t01	Wine grape	cytosol	58.35	44.32
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	48.38	41.99
HORVU6Hr1G095300.1	Barley	plastid	43.39	41.93
GSMUA_Achr11P...	Banana	plastid	43.89	41.22
OQU86038	Sorghum	plastid	43.89	38.34
GSMUA_Achr11P...	Banana	nucleus	58.6	16.99

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266837	wikigene:100266837	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CCB62653
ProteinID:CCB62653.1	UniProt:F6I6T5	EMBL:FN596759	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266837	wikigene:LOC100266837	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC64276	UniParc:UPI000210ABA2	ArrayExpress:VIT_18s0122g01240
EnsemblPlantsGene:VIT_18s0122g01240	EnsemblPlants:VIT_18s0122g01240.t01	unigene:Vvi.19004	RefSeq:XP_002271454	RefSeq:XP_002271454.2	RefSeq:XP_010663978.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:836433..838752

Molecular Weight (calculated)

44191.7 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.354

Length

401 amino acids

Sequence
(BLAST)

001: MSCLPCMSPR KRDVSRIEDD NGTTGPSSSC HSIDDSLGTT RGKGSFDSSD NGKGKGSLNG KAHPKSNAAR SFTFRQLATA TRNFKATNLI GEGGFGKVYK
101: GRLDTGEIVA IKQLNHDGLQ GFQEFIVEVL MLSLLHHSNL VTLIGYCTDG DQRLLVYEYM AMGSLEHHLF DLGPDQEPLG WNTRIQIAVG AARGLEYLHC
201: KANPPVIYRD LKSANILLDN EFNPKLSDFG LAKLGPVGDN THVSTRVMGT YGYCAPEYAM SGKLTLKSDI YSFGVVLLEL ITGRKAIDTS KRQGEQNLVA
301: WSRPFLKDRK KFIQLVDPQL QGNFPVRALH HAIAITAMCL QEQPNFRPLI GDIVVALEYL ASESHSSEPH RNQVRLPSSS PSQGSRNSNS FLQEPYSRNI
401: F

Best Arabidopsis Sequence Match ( AT1G20650.1 )
(BLAST)

001: MTCCFSCLNP RTKDIRVDID NARCNSRYQT DSSVHGSDTT GTESISGILV NGKVNSPIPG GGARSFTFKE LAAATRNFRE VNLLGEGGFG RVYKGRLDSG
101: QVVAIKQLNP DGLQGNREFI VEVLMLSLLH HPNLVTLIGY CTSGDQRLLV YEYMPMGSLE DHLFDLESNQ EPLSWNTRMK IAVGAARGIE YLHCTANPPV
201: IYRDLKSANI LLDKEFSPKL SDFGLAKLGP VGDRTHVSTR VMGTYGYCAP EYAMSGKLTV KSDIYCFGVV LLELITGRKA IDLGQKQGEQ NLVTWSRPYL
301: KDQKKFGHLV DPSLRGKYPR RCLNYAIAII AMCLNEEAHY RPFIGDIVVA LEYLAAQSRS HEARNVSSPS PEISRTPRRD L

Arabidopsis Description

PBL21ASG5 [Source:UniProtKB/TrEMBL;Acc:A0A178W8H8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.