Factsheet for VIT_04s0043g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P29320_001	Banana	cytosol	48.48	61.37
VIT_10s0116g00850.t01	Wine grape	cytosol	45.45	57.85
VIT_13s0067g03410.t01	Wine grape	cytosol	46.54	57.18
GSMUA_Achr8P02730_001	Banana	cytosol	46.1	57.1
VIT_19s0090g00030.t01	Wine grape	mitochondrion	43.51	57.1
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	42.64	57.1
GSMUA_Achr6P15570_001	Banana	cytosol	47.19	57.07
VIT_07s0005g06450.t01	Wine grape	plastid	52.38	56.67
GSMUA_Achr10P...	Banana	cytosol, plastid	50.87	55.16
VIT_08s0040g03060.t01	Wine grape	nucleus	46.1	53.79
VIT_03s0038g03810.t01	Wine grape	cytosol	41.56	52.6
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	47.62	50.81
VIT_19s0014g00940.t01	Wine grape	cytosol, plastid	46.97	50.7
TraesCS3D01G543300.1	Wheat	cytosol	42.86	49.75
VIT_01s0146g00250.t01	Wine grape	cytosol	49.78	49.57
Os05t0125400-00	Rice	cytosol	46.75	49.09
EES17638	Sorghum	peroxisome, plastid	47.19	48.77
HORVU3Hr1G117850.1	Barley	cytosol	41.99	48.5
TraesCS3B01G603300.1	Wheat	cytosol, plastid	43.07	48.42
VIT_18s0122g01240.t01	Wine grape	cytosol	41.99	48.38
TraesCS1B01G085000.1	Wheat	plastid	46.75	48.32
HORVU1Hr1G013840.1	Barley	mitochondrion	46.54	48.31
TraesCS1D01G067700.1	Wheat	plastid	46.75	48.21
TraesCS3A01G537900.1	Wheat	cytosol	42.64	48.05
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	46.32	47.77
VIT_14s0068g01540.t01	Wine grape	cytosol	43.51	47.63
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	43.51	46.53
VIT_05s0020g01770.t01	Wine grape	cytosol	52.38	45.83
Solyc05g055860.2.1	Tomato	cytosol	47.19	44.86
PGSC0003DMT400060019	Potato	cytosol	46.97	43.31
Zm00001d041938_P001	Maize	plastid	43.94	42.56
AT3G02810.1	Thale cress	cytosol	50.87	42.11
CDY51533	Canola	cytosol	50.22	42.11
Bra040602.1-P	Field mustard	cytosol	50.22	41.95
CDY28710	Canola	cytosol	49.78	41.59
PGSC0003DMT400031291	Potato	cytosol	49.57	40.89
CDX92014	Canola	cytosol	50.22	40.77
Bra001065.1-P	Field mustard	cytosol	50.0	40.67
CDX74234	Canola	cytosol	50.0	40.67
Solyc04g050970.2.1	Tomato	plastid	49.13	40.46
KRH68843	Soybean	cytosol	50.65	40.34
CDX78694	Canola	cytosol	48.27	38.72
Bra006358.1-P	Field mustard	cytosol	48.27	38.72
CDX70697	Canola	cytosol	48.92	38.63
KRG97093	Soybean	cytosol	49.35	38.38
CDY55581	Canola	cytosol	47.19	37.2
Bra008617.1-P	Field mustard	cytosol	47.62	37.16
CDX69447	Canola	cytosol	47.62	37.1
AT5G16500.1	Thale cress	cytosol	49.78	36.16
KRG92591	Soybean	cytosol	47.62	35.54
KRH34195	Soybean	cytosol	47.84	35.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100251076	wikigene:100251076	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CCB51884
ProteinID:CCB51884.1	UniProt:F6HI38	EMBL:FN595763	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100251076	wikigene:LOC100251076	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00021092F0	ArrayExpress:VIT_04s0043g01030
EnsemblPlantsGene:VIT_04s0043g01030	EnsemblPlants:VIT_04s0043g01030.t01	unigene:Vvi.20861	RefSeq:XP_002267444	RefSeq:XP_002267444.1	SEG:seg

Description

No Description!

Coordinates

chr4:-:15710762..15713817

Molecular Weight (calculated)

51072.7 Da

IEP (calculated)

5.158

GRAVY (calculated)

-0.614

Length

462 amino acids

Sequence
(BLAST)

001: MSCFPCFTSK VKKTNSKDAN SRSSSESPPH GVYLTFMQCF VRIIDLAKAR NRNETPKADG GPNINVKAFT FWELASATKN FRQECLLGEG AFGRVYKGQL
101: ENSGQDVAVK QLDRNGLHGN KEFLQEVSML SLLDHENLVN LVGYCADGEQ RLLVCEYMSL GSLVDHLFEM KPDQEPLSWP TRMNLALGAA RGVEYLHEKA
201: NPPVLYRDLK SSNILLCGDF HPKLSTFGLG KAKSVGDKMQ VSRVMGTYGY CAPEYSRDSQ FTLKSDIYSF GVVLLELITG RKAIDTTRPM DEQNLVSWAQ
301: PKFRDPKKFP EMADPLLKRR FPEKSLNQAV AIAAMCLQEE ASVRPLISDV VTTLSFLVAS KEENMCDTTP LPSLPPADSG HEKGGDSSEH TSDHEDEGSD
401: CSKSGSQEGS EEESEEEHQH DHNRPSRDGS EQGDHDSGDE CHSAVTGSNE WGSNSSHNSN SL

Best Arabidopsis Sequence Match ( AT3G02810.1 )
(BLAST)

001: MHCFPCFSSP KNKKSSTTNE TNDNNEPKPD DRRRAEETEE IEQSEGTSLK IFTFRELATA TKNFRQECLL GEGGFGRVYK GTLKSTGQVV AVKQLDKHGL
101: HGNKEFQAEV LSLGQLDHPN LVKLIGYCAD GDQRLLVYDY ISGGSLQDHL HEPKADSDPM DWTTRMQIAY AAAQGLDYLH DKANPPVIYR DLKASNILLD
201: DDFSPKLSDF GLHKLGPGTG DKMMALSSRV MGTYGYSAPE YTRGGNLTLK SDVYSFGVVL LELITGRRAL DTTRPNDEQN LVSWAQPIFR DPKRYPDMAD
301: PVLENKFSER GLNQAVAIAS MCVQEEASAR PLISDVMVAL SFLSMPTEDG IPTTVPILSF KDKSMSIALS RHDSNLVSPP PELATEDDKS STSSGEESSL
401: ESEKESVSKN EYKKKHEEED SSMESDDESD SNSEHEKDQP PKPIDEKNQA QSLKIKYRYS WEDIDVNDER LSSKSSQKSN DESTSSRYDS DRDQDEKGKE
501: EEEEEEAEEK HTHIEHIDSS KTDDDQSVYF DNDDDSGDDN GGSLHRIKSD VAIDSIKE

Arabidopsis Description

LIP2Receptor-like kinase LIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8S2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.