Factsheet for VIT_13s0067g03410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g03060.t01	Wine grape	nucleus	83.78	79.55
VIT_19s0090g00030.t01	Wine grape	mitochondrion	58.51	62.5
VIT_06s0004g03670.t01	Wine grape	cytosol, plastid	71.28	62.04
VIT_10s0116g00850.t01	Wine grape	cytosol	59.31	61.43
VIT_01s0146g00250.t01	Wine grape	cytosol	72.87	59.05
VIT_03s0038g03810.t01	Wine grape	cytosol	56.65	58.36
VIT_05s0020g01770.t01	Wine grape	cytosol	81.12	57.77
VIT_18s0122g01240.t01	Wine grape	cytosol	61.44	57.61
VIT_19s0014g00940.t01	Wine grape	cytosol, plastid	62.77	55.14
VIT_07s0005g06450.t01	Wine grape	plastid	61.97	54.57
VIT_14s0068g01540.t01	Wine grape	cytosol	55.85	49.76
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	57.18	46.54

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250154	wikigene:100250154	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20
ProteinID:CBI25327	ProteinID:CBI25327.3	UniProt:D7T495	EMBL:FN595514	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250154	wikigene:LOC100250154	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TIGR:TC68253	UniParc:UPI00015CAD90	ArrayExpress:VIT_13s0067g03410	EnsemblPlantsGene:VIT_13s0067g03410
EnsemblPlants:VIT_13s0067g03410.t01	unigene:Vvi.19138	unigene:Vvi.8104	RefSeq:XP_002281418	RefSeq:XP_002281418.1	SEG:seg

Description

No Description!

Coordinates

chr13:+:1906507..1911823

Molecular Weight (calculated)

41605.1 Da

IEP (calculated)

9.438

GRAVY (calculated)

-0.419

Length

376 amino acids

Sequence
(BLAST)

001: MGCFPCAGKS NKKGKKNQEK NSKDQIPSTS ERLKVNSSVD GRKDASKDGG SDHIAAHTFT FRELAAATKN FRAECLLGEG GFGRVYKGRL ESTNKIVAIK
101: QLDRNGLQGN REFLVEVLML SLLHHPNLVN LIGYCADGDQ RLLVYEYMAL GSLEDHLHDL PPDKKRLDWN TRMKIAAGAA KGLEYLHDKA SPPVIYRDLQ
201: CSNILLGEGY HPKLSDFGLA KLGPVGDKTH VSTRVMGTYG YCAPEYAMTG QLTLKSDVYS FGVVLLEIIT GRKAIDNSKA AGEHNLVAWA RPLFKDRRKF
301: SQMADPMLHG QYPLRGLYQA LAVAAMCVQE QPNMRPLIAD VVTALTYLAS QKYDPETQPV QSSRMGSSTP RSRREL

Best Arabidopsis Sequence Match ( AT5G18610.1 )
(BLAST)

001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND

Arabidopsis Description

PBL27Serine/threonine-protein kinase PBL27 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.