Factsheet for AT5G16500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008617.1-P	Field mustard	cytosol	74.84	80.41
CDX69447	Canola	cytosol	74.69	80.1
CDY55581	Canola	cytosol	73.58	79.86
CDX78694	Canola	cytosol	71.23	78.65
Bra006358.1-P	Field mustard	cytosol	71.23	78.65
CDX70697	Canola	cytosol	72.01	78.29
AT3G02810.1	Thale cress	cytosol	59.43	67.74
AT3G24790.2	Thale cress	plastid	33.49	55.91
GSMUA_Achr5P29320_001	Banana	cytosol	32.08	55.89
GSMUA_Achr6P15570_001	Banana	cytosol	32.7	54.45
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	29.4	54.2
AT5G02800.1	Thale cress	plastid	31.6	53.17
AT3G07070.1	Thale cress	cytosol	34.59	53.14
GSMUA_Achr8P02730_001	Banana	cytosol	30.97	52.81
AT4G13190.1	Thale cress	cytosol	31.76	51.93
GSMUA_Achr10P...	Banana	cytosol, plastid	34.12	50.94
AT3G20530.1	Thale cress	mitochondrion	30.35	50.0
VIT_04s0043g01030.t01	Wine grape	cytosol, plastid	36.16	49.78
AT1G20650.1	Thale cress	cytosol	29.4	49.08
TraesCS3D01G543300.1	Wheat	cytosol	29.87	47.74
AT1G76370.1	Thale cress	cytosol	28.46	47.51
HORVU3Hr1G117850.1	Barley	cytosol	29.4	46.75
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	31.76	46.65
TraesCS3A01G537900.1	Wheat	cytosol	30.03	46.59
TraesCS3B01G603300.1	Wheat	cytosol, plastid	30.03	46.47
AT1G61860.1	Thale cress	cytosol	27.99	45.76
Os05t0125400-00	Rice	cytosol	31.29	45.23
AT5G13160.1	Thale cress	cytosol	32.39	45.18
EES17638	Sorghum	peroxisome, plastid	31.45	44.74
HORVU1Hr1G013840.1	Barley	mitochondrion	30.82	44.04
TraesCS1D01G067700.1	Wheat	plastid	30.66	43.53
TraesCS1B01G085000.1	Wheat	plastid	30.5	43.4
TraesCS1A01G066700.1	Wheat	peroxisome, plastid	30.35	43.08
AT2G28590.1	Thale cress	cytosol	28.62	42.92
KRH68843	Soybean	cytosol	38.68	42.41
AT5G18610.2	Thale cress	plastid	33.96	42.11
Solyc05g055860.2.1	Tomato	cytosol	32.08	41.98
KRG97093	Soybean	cytosol	39.15	41.92
PGSC0003DMT400060019	Potato	cytosol	32.39	41.12
Solyc04g050970.2.1	Tomato	plastid	35.53	40.29
PGSC0003DMT400031291	Potato	cytosol	35.38	40.18
Zm00001d041938_P001	Maize	plastid	29.87	39.83
KRG92591	Soybean	cytosol	37.89	38.93
KRH34195	Soybean	cytosol	36.79	37.2
AT1G07870.2	Thale cress	cytosol	31.45	37.17

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:831511	ProteinID:AED92301.1	ArrayExpress:AT5G16500
EnsemblPlantsGene:AT5G16500	RefSeq:AT5G16500	TAIR:AT5G16500	RefSeq:AT5G16500-TAIR-G	EnsemblPlants:AT5G16500.1	TAIR:AT5G16500.1
ProteinID:BAB09618.1	ncoils:Coil	EMBL:DQ446955	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009856	GO:GO:0009987	GO:GO:0010183
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
GO:GO:0090404	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_197154.2	PFAM:PF00069	PO:PO:0000282
PO:PO:0001016	PO:PO:0001017	PO:PO:0001185	PO:PO:0005660	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q1PDW3	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000034F21D	SEG:seg	:	:

Description

LIP1Receptor-like kinase LIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW3]

Coordinates

chr5:-:5386524..5389311

Molecular Weight (calculated)

71555.5 Da

IEP (calculated)

4.397

GRAVY (calculated)

-0.953

Length

636 amino acids

Sequence
(BLAST)

001: MIIMMNCFPC FTSQKSRNAP CTTNETNDDN VEHDEFRPPV VATTKRTEER EPAEQQPPVK TFNFRELATA TKNFRQECLL GEGGFGRVYK GTLQSTGQLV
101: AVKQLDKHGL HGNKEFLAEV LSLAKLEHPN LVKLIGYCAD GDQRLLVFEY VSGGSLQDHL YEQKPGQKPM DWITRMKIAF GAAQGLDYLH DKVTPAVIYR
201: DLKASNILLD AEFYPKLCDF GLHNLEPGTG DSLFLSSRVM DTYGYSAPEY TRGDDLTVKS DVYSFGVVLL ELITGRRAID TTKPNDEQNL VAWAQPIFKD
301: PKRYPDMADP LLRKNFSERG LNQAVAITSM CLQEEPTARP LISDVMVALS FLSMSTEDGI PATVPMESFR DKSMSIALSR HGSCSVTPFC ISRKDVGNKS
401: SSSSDSEDEE EEKEQKAEKE EESTSKKRQE QEETATDSDD ESDSNSEKDQ EEEQSQLEKA RESSSSSSDS GSERRSIDET NATAQSLKIS YSNYSSEEED
501: NEKLSSKSSC KSNEESTFSR YDSGRDHDDS SRNTSMRINS LAHDDKEEDE EENHETRSYS DHDDSPRNTS MRINSLSHDD DEEEEEENHQ TRLEHIHSSK
601: SEDQSVYSDD DAGESGESSL HRIEAKEEEH ISSDHD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.