CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02800.1	KRH10294	AT3G46090.1	17259181
AT5G02800.1	KRH23029	AT3G46090.1	17259181
AT5G02800.1	KRH24840	AT3G46090.1	17259181
AT5G02800.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67618	Soybean	cytosol	95.79	96.04
KRH19781	Soybean	cytosol	90.53	89.82
KRH32375	Soybean	cytosol	90.26	89.56
Solyc10g085990.1.1	Tomato	plastid	76.32	78.17
PGSC0003DMT400045344	Potato	plastid	76.32	78.17
CDY55687	Canola	plastid	76.84	77.87
AT5G02800.1	Thale cress	plastid	77.37	77.78
Bra028862.1-P	Field mustard	plastid	76.58	77.39
CDY04867	Canola	plastid	76.32	77.13
VIT_08s0040g03060.t01	Wine grape	nucleus	80.26	77.02
GSMUA_Achr6P15480_001	Banana	cytosol	77.37	76.17
PGSC0003DMT400071735	Potato	cytosol, mitochondrion, nucleus	76.58	74.62
Solyc09g007170.2.1	Tomato	cytosol, mitochondrion, nucleus	76.58	74.42
GSMUA_Achr10P...	Banana	cytosol	75.53	74.16
KRH24971	Soybean	cytosol	68.68	62.89
KRG88698	Soybean	cytosol	68.16	62.26
KRH51602	Soybean	cytosol, plastid	55.79	61.63
GSMUA_AchrUn_...	Banana	plasma membrane	76.58	61.52
KRH14431	Soybean	cytosol	61.05	61.21
KRH73720	Soybean	plastid	61.05	61.21
GSMUA_Achr10P...	Banana	cytosol	70.79	59.12
KRH06009	Soybean	cytosol, plastid	55.53	59.1
KRH60919	Soybean	cytosol	55.79	59.05
KRG93133	Soybean	cytosol	69.21	56.44
KRH36361	Soybean	cytosol	68.16	56.3
KRH46858	Soybean	cytosol	69.21	56.08
KRH11239	Soybean	cytosol, plastid	75.26	55.64
KRH21034	Soybean	cytosol, plastid	75.0	55.56
KRH46122	Soybean	cytosol	58.16	53.64
KRH46760	Soybean	cytosol	61.58	53.55
KRH10353	Soybean	cytosol	67.11	52.58
KRH22964	Soybean	cytosol	65.26	52.21
KRH11410	Soybean	plastid	51.32	50.0
KRG94631	Soybean	extracellular	53.16	48.79
KRH06889	Soybean	cytosol	52.89	47.41
KRG99800	Soybean	cytosol	60.0	47.4
KRH20875	Soybean	cytosol, plastid	50.53	45.18
KRH68843	Soybean	cytosol	54.47	35.69
KRG97093	Soybean	cytosol	53.68	34.34
KRH34195	Soybean	cytosol	50.79	30.68
KRG92591	Soybean	cytosol	49.74	30.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100793549	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	EMBL:ACUP02012140
EnsemblPlantsGene:GLYMA_19G177300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	UniProt:I1NA42	InterPro:IPR000719	EnsemblPlants:KRG95902
ProteinID:KRG95902	ProteinID:KRG95902.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF513	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233F2FB	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:43664465..43667712

Molecular Weight (calculated)

41985.5 Da

IEP (calculated)

9.537

GRAVY (calculated)

-0.424

Length

380 amino acids

Sequence
(BLAST)

001: MGWIPCSGYS GTKNKVEKME AQDSLVGQIK ATTGKLKRNS STKSKDTSKN GNPDHIAAQT FSFRELATAT RNFRAECLLG EGGFGRVYKG RLESINQVVA
101: IKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGCLEDHLH DIPPGKKQLD WNTRMKIAAG AAKGLEYLHD KANPPVIYRD
201: LKCSNILLGE GYHPKLSDFG LAKLGPVGEN THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDNS KSAGEQNLVA WARPLFKDRR
301: KFSQMADPTL QGQYPPRGLY QVIAVAAMCV QEQANMRPVI ADVVTALSYL ASQRYDPNTQ HTGQSSRHAP GTPPRNRRGQ

Best Arabidopsis Sequence Match ( AT5G02800.1 )
(BLAST)

001: MGWIPCSGKS SGRNKTRRNG DHKLDRKSSD CSVSTSEKSR AKSSLSESKS KGSDHIVAQT FTFSELATAT RNFRKECLIG EGGFGRVYKG YLASTSQTAA
101: IKQLDHNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DISPGKQPLD WNTRMKIAAG AAKGLEYLHD KTMPPVIYRD
201: LKCSNILLDD DYFPKLSDFG LAKLGPVGDK SHVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVLLEI ITGRKAIDSS RSTGEQNLVA WARPLFKDRR
301: KFSQMADPML QGQYPPRGLY QALAVAAMCV QEQPNLRPLI ADVVTALSYL ASQKFDPLAQ PVQGSLFAPG TPPRSKRV

Arabidopsis Description

PBL7Probable serine/threonine-protein kinase PBL7 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.