Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10294 | Soybean | nucleus | 91.81 | 91.28 |
| KRH29844 | Soybean | nucleus, plastid | 54.97 | 65.28 |
| KRH24840 | Soybean | nucleus | 57.89 | 63.46 |
| Solyc11g073060.1.1 | Tomato | nucleus | 43.27 | 48.05 |
| PGSC0003DMT400040143 | Potato | nucleus | 45.61 | 46.99 |
| KRH19739 | Soybean | cytosol, nucleus | 43.27 | 46.54 |
| KRH32333 | Soybean | nucleus | 44.44 | 46.34 |
| PGSC0003DMT400040142 | Potato | nucleus | 44.44 | 46.06 |
| PGSC0003DMT400040144 | Potato | nucleus | 44.44 | 46.06 |
| PGSC0003DMT400040141 | Potato | nucleus | 45.61 | 45.88 |
| PGSC0003DMT400040207 | Potato | nucleus | 43.86 | 45.73 |
| PGSC0003DMT400040206 | Potato | nucleus | 45.61 | 45.61 |
| Bra020284.1-P | Field mustard | nucleus | 29.82 | 45.54 |
| KRG90559 | Soybean | nucleus | 45.61 | 45.09 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 41.52 | 44.65 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 45.61 | 44.57 |
| KRG95848 | Soybean | nucleus | 44.44 | 44.44 |
| Solyc06g075780.1.1 | Tomato | nucleus | 39.77 | 44.16 |
| KRH67564 | Soybean | nucleus | 44.44 | 43.93 |
| KRH70509 | Soybean | nucleus | 46.2 | 43.89 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 41.52 | 43.29 |
| KRG95850 | Soybean | nucleus | 39.18 | 43.23 |
| KRH32335 | Soybean | nucleus | 45.03 | 43.02 |
| KRH67566 | Soybean | nucleus | 39.18 | 42.41 |
| KRH36195 | Soybean | extracellular | 45.61 | 42.16 |
| KRH19742 | Soybean | nucleus | 44.44 | 41.76 |
| CDY31593 | Canola | nucleus | 38.01 | 40.62 |
| CDX71073 | Canola | nucleus | 37.43 | 40.51 |
| CDX80226 | Canola | nucleus | 38.01 | 40.37 |
| AT3G46080.1 | Thale cress | nucleus | 38.6 | 40.24 |
| Bra002528.1-P | Field mustard | nucleus | 37.43 | 40.0 |
| Bra006692.1-P | Field mustard | nucleus | 36.84 | 39.62 |
| CDX88724 | Canola | nucleus | 36.84 | 39.62 |
| Bra006691.1-P | Field mustard | nucleus | 36.84 | 39.62 |
| CDY09252 | Canola | nucleus | 36.26 | 39.49 |
| CDY65692 | Canola | nucleus | 36.84 | 39.38 |
| AT5G59820.1 | Thale cress | nucleus | 36.84 | 38.89 |
| CDY30924 | Canola | nucleus | 38.6 | 38.82 |
| AT3G46090.1 | Thale cress | nucleus | 38.01 | 38.69 |
| Bra019477.1-P | Field mustard | nucleus | 38.01 | 38.24 |
| CDX68366 | Canola | nucleus | 39.18 | 37.85 |
| CDY58688 | Canola | nucleus | 19.3 | 37.08 |
| KRH19741 | Soybean | nucleus | 37.43 | 36.36 |
| KRH32334 | Soybean | nucleus | 38.01 | 35.91 |
| AT3G46070.1 | Thale cress | nucleus | 35.67 | 35.88 |
| CDX99130 | Canola | nucleus | 38.6 | 34.38 |
| Bra018225.1-P | Field mustard | nucleus | 38.01 | 33.85 |
| CDY30925 | Canola | nucleus | 33.33 | 33.73 |
| Bra019476.1-P | Field mustard | nucleus | 33.33 | 33.73 |
| CDX86044 | Canola | nucleus | 37.43 | 31.37 |
| KRH67769 | Soybean | nucleus | 37.43 | 29.63 |
| KRH19960 | Soybean | nucleus | 40.94 | 24.31 |
| KRH32562 | Soybean | nucleus | 40.35 | 23.15 |
| KRH30555 | Soybean | nucleus | 41.52 | 23.05 |
| KRH25111 | Soybean | nucleus, plastid | 42.11 | 22.86 |
| KRH22825 | Soybean | nucleus | 39.77 | 21.59 |
| KRH26537 | Soybean | nucleus, plastid | 39.18 | 21.41 |
| KRG92135 | Soybean | nucleus | 40.35 | 21.1 |
| KRG96047 | Soybean | mitochondrion | 41.52 | 19.67 |
| KRH34655 | Soybean | nucleus | 40.94 | 19.66 |
Protein Annotations
| EntrezGene:100781211 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02008452 | EnsemblPlantsGene:GLYMA_13G333400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0010200 | InterPro:IPR013087 | UniProt:K7M3C6 | EnsemblPlants:KRH23029 |
| ProteinID:KRH23029 | ProteinID:KRH23029.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF162 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000233ADF7 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
Description
hypothetical protein
Coordinates
chr13:+:42753092..42754057
Molecular Weight (calculated)
19265.4 Da
IEP (calculated)
8.928
GRAVY (calculated)
-0.613
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGREEGEL DMANCLMLLT KVGESETNYP ISKGRDDGDF KCKTCNRRFS SFQALGGHRA SHKKPKLMVT DLSWHHELPN NPTMKQPRMH PCPICGLEFA
101: IGQALGGHMR KHRSAINDGL LCGKPSSLSI LKNSSKDAHE RLNLRLDLNL TPMEEDDLKL NLRTPVLNCF I
101: IGQALGGHMR KHRSAINDGL LCGKPSSLSI LKNSSKDAHE RLNLRLDLNL TPMEEDDLKL NLRTPVLNCF I
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.