Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99130 | Canola | nucleus | 88.24 | 93.75 |
| CDY30924 | Canola | nucleus | 58.82 | 70.59 |
| CDX68366 | Canola | nucleus | 60.78 | 70.06 |
| CDY30925 | Canola | nucleus | 53.92 | 65.09 |
| AT3G46070.1 | Thale cress | nucleus | 53.92 | 64.71 |
| CDY58688 | Canola | nucleus | 27.94 | 64.04 |
| CDY65692 | Canola | nucleus | 50.0 | 63.75 |
| CDX88724 | Canola | nucleus | 49.51 | 63.52 |
| CDX71073 | Canola | nucleus | 48.53 | 62.66 |
| CDY31593 | Canola | nucleus | 49.02 | 62.5 |
| CDX80226 | Canola | nucleus | 48.53 | 61.49 |
| CDY09252 | Canola | nucleus | 47.06 | 61.15 |
| CDX77198 | Canola | nucleus | 31.86 | 43.92 |
| CDY31725 | Canola | nucleus | 31.86 | 43.92 |
| CDY15775 | Canola | nucleus | 31.37 | 42.67 |
| CDY04582 | Canola | nucleus | 31.37 | 42.67 |
| Solyc06g075780.1.1 | Tomato | nucleus | 31.86 | 42.21 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 32.35 | 40.24 |
| PGSC0003DMT400040143 | Potato | nucleus | 31.37 | 38.55 |
| Solyc11g073060.1.1 | Tomato | nucleus | 28.92 | 38.31 |
| PGSC0003DMT400040144 | Potato | nucleus | 30.88 | 38.18 |
| KRH24840 | Soybean | nucleus | 28.92 | 37.82 |
| PGSC0003DMT400040142 | Potato | nucleus | 30.39 | 37.58 |
| KRH23029 | Soybean | nucleus | 31.37 | 37.43 |
| PGSC0003DMT400040207 | Potato | nucleus | 29.9 | 37.2 |
| PGSC0003DMT400040141 | Potato | nucleus | 30.88 | 37.06 |
| PGSC0003DMT400040206 | Potato | nucleus | 30.88 | 36.84 |
| KRH29844 | Soybean | nucleus, plastid | 25.98 | 36.81 |
| KRH10294 | Soybean | nucleus | 30.88 | 36.63 |
| CDX93380 | Canola | nucleus | 31.86 | 36.31 |
| CDY18446 | Canola | nucleus | 31.37 | 35.56 |
| CDX91362 | Canola | nucleus | 30.88 | 35.0 |
| CDX74961 | Canola | nucleus | 29.9 | 33.89 |
| CDY65670 | Canola | nucleus | 28.43 | 32.4 |
| CDY30857 | Canola | nucleus | 26.47 | 32.34 |
| CDY07790 | Canola | nucleus | 28.43 | 32.04 |
| CDY07578 | Canola | nucleus | 25.98 | 31.55 |
| CDY52747 | Canola | nucleus | 25.98 | 31.55 |
| CDX76199 | Canola | nucleus | 25.49 | 29.89 |
| CDY11027 | Canola | nucleus | 25.98 | 22.94 |
| CDX80870 | Canola | nucleus | 27.45 | 22.05 |
| CDY11255 | Canola | nucleus | 27.45 | 22.05 |
| CDY71034 | Canola | nucleus | 26.47 | 22.04 |
| CDY30501 | Canola | nucleus | 26.96 | 22.0 |
| CDY70037 | Canola | nucleus | 26.96 | 21.83 |
| CDY04544 | Canola | nucleus | 26.96 | 21.48 |
| CDX71375 | Canola | nucleus | 26.47 | 21.18 |
| CDY41350 | Canola | nucleus, plastid | 25.98 | 21.03 |
| CDY44371 | Canola | nucleus | 26.96 | 20.52 |
| CDY04886 | Canola | nucleus | 26.96 | 20.52 |
| CDY10376 | Canola | nucleus | 26.47 | 20.38 |
| CDX70302 | Canola | nucleus | 25.98 | 20.0 |
| CDY11288 | Canola | nucleus | 28.92 | 17.93 |
| CDY58436 | Canola | nucleus | 28.92 | 17.35 |
| CDY00945 | Canola | nucleus | 27.94 | 16.86 |
| CDY08602 | Canola | nucleus | 27.94 | 16.86 |
| CDY61764 | Canola | nucleus | 27.94 | 16.76 |
| CDX70228 | Canola | nucleus | 26.47 | 16.67 |
| CDY44852 | Canola | nucleus | 25.98 | 16.31 |
| CDX89591 | Canola | nucleus | 16.18 | 15.87 |
| CDY05027 | Canola | nucleus | 12.25 | 14.97 |
| CDY42128 | Canola | nucleus | 14.71 | 13.45 |
Protein Annotations
| EnsemblPlants:CDX86044 | EnsemblPlantsGene:GSBRNA2T00143999001 | Gene3D:3.30.160.60 | GO:A0A078DCK3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF318 | PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX86044 | ProteinID:CDX86044.1 | ScanProsite:PS00028 |
| SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EF07E3 | MapMan:15.5.15 | : |
Description
BnaC03g55590D
Coordinates
chrLK031844:+:591422..592036
Molecular Weight (calculated)
22393.2 Da
IEP (calculated)
8.849
GRAVY (calculated)
-0.780
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MVARSENLNR TVENRAQDSE KLDRTVEGTA ANNEKLERTV EDKAANCLML LSRIGENGGG GRESRVYRCK TCMKEFSSFQ SLGGHRASHN KHVNNNSSDE
101: QSSLSSGSIA KRKTTNTTRS HRCPICGVEF PMGQALGGHM RKHRNEEEAS GALVTRSFFP EAATSMITTL KKSSSGKRVE CFDLGPDSAE SSINLNLELG
201: RSMY
101: QSSLSSGSIA KRKTTNTTRS HRCPICGVEF PMGQALGGHM RKHRNEEEAS GALVTRSFFP EAATSMITTL KKSSSGKRVE CFDLGPDSAE SSINLNLELG
201: RSMY
001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS
Arabidopsis Description
ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.