Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70037 | Canola | nucleus | 98.0 | 97.22 |
| Bra034396.1-P | Field mustard | nucleus | 97.6 | 83.56 |
| CDX71375 | Canola | nucleus | 80.0 | 78.43 |
| CDY04544 | Canola | nucleus | 80.0 | 78.12 |
| AT2G28200.1 | Thale cress | nucleus | 81.6 | 71.33 |
| CDY11027 | Canola | nucleus | 36.4 | 39.39 |
| CDY04582 | Canola | nucleus | 23.6 | 39.33 |
| CDY15775 | Canola | nucleus | 23.6 | 39.33 |
| CDY31725 | Canola | nucleus | 23.2 | 39.19 |
| CDX77198 | Canola | nucleus | 23.2 | 39.19 |
| CDY30857 | Canola | nucleus | 25.6 | 38.32 |
| CDY52747 | Canola | nucleus | 24.8 | 36.9 |
| CDX93380 | Canola | nucleus | 26.4 | 36.87 |
| CDX76199 | Canola | nucleus | 25.6 | 36.78 |
| CDX91362 | Canola | nucleus | 26.4 | 36.67 |
| CDY07578 | Canola | nucleus | 24.4 | 36.31 |
| CDX74961 | Canola | nucleus | 26.0 | 36.11 |
| CDX70302 | Canola | nucleus | 38.0 | 35.85 |
| CDX80870 | Canola | nucleus | 36.4 | 35.83 |
| CDY65670 | Canola | nucleus | 25.6 | 35.75 |
| CDY18446 | Canola | nucleus | 25.6 | 35.56 |
| CDY07790 | Canola | nucleus | 25.6 | 35.36 |
| CDY10376 | Canola | nucleus | 37.2 | 35.09 |
| CDY11255 | Canola | nucleus | 35.2 | 34.65 |
| CDY41350 | Canola | nucleus, plastid | 34.8 | 34.52 |
| CDY71034 | Canola | nucleus | 33.6 | 34.29 |
| CDY09252 | Canola | nucleus | 21.2 | 33.76 |
| CDY31593 | Canola | nucleus | 21.6 | 33.75 |
| CDY04886 | Canola | nucleus | 36.0 | 33.58 |
| CDX71073 | Canola | nucleus | 21.2 | 33.54 |
| CDX80226 | Canola | nucleus | 21.6 | 33.54 |
| CDX88724 | Canola | nucleus | 21.2 | 33.33 |
| CDY44371 | Canola | nucleus | 35.6 | 33.21 |
| CDX68366 | Canola | nucleus | 23.2 | 32.77 |
| CDX70228 | Canola | nucleus | 42.4 | 32.72 |
| CDY44852 | Canola | nucleus | 42.4 | 32.62 |
| CDY11288 | Canola | nucleus | 42.8 | 32.52 |
| CDY65692 | Canola | nucleus | 20.8 | 32.5 |
| CDY58436 | Canola | nucleus | 42.4 | 31.18 |
| CDY08602 | Canola | nucleus | 42.0 | 31.07 |
| CDY30924 | Canola | nucleus | 20.8 | 30.59 |
| CDY00945 | Canola | nucleus | 41.2 | 30.47 |
| CDY58688 | Canola | nucleus | 10.8 | 30.34 |
| CDY61764 | Canola | nucleus | 41.2 | 30.29 |
| CDX99130 | Canola | nucleus | 22.0 | 28.65 |
| CDY30925 | Canola | nucleus | 19.2 | 28.4 |
| CDX86044 | Canola | nucleus | 22.0 | 26.96 |
| CDX89591 | Canola | nucleus | 21.6 | 25.96 |
| CDY42128 | Canola | nucleus | 21.6 | 24.22 |
| CDY05027 | Canola | nucleus | 14.0 | 20.96 |
Protein Annotations
| EnsemblPlants:CDY30501 | EnsemblPlantsGene:GSBRNA2T00045216001 | Gene3D:3.30.160.60 | GO:A0A078GYD7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF318 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY30501 | ProteinID:CDY30501.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE2048 | UniProt:A0A078GYD7 | MapMan:15.5.15 | : |
Description
BnaA04g16320DBnaA04g16320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYD7]
Coordinates
chrLK032254:-:104079..104942
Molecular Weight (calculated)
27121.5 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.580
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSQDHVGSD QTQIIKGKRT KRQRSLSSTF LVAAAAATTN TSSSSSAGDG GGGRAVSDEY NSAVSSPVTT TDCTEEEEDM AICLIMLARG AALSPDLKNS
101: RKADKTFSPA ENSSFFVYEC KTCSRTFSSF QALGGHRASH KKPREGQKNN FKANKVHECS ICGSEFTSGQ ALGGHMRRHR TATTAVIPVA TTEVSRNSTE
201: EETENLSSYI EQRKYLPLDL NLPAPEDDLR ESKFQGIVFS TTPALIDCHY
101: RKADKTFSPA ENSSFFVYEC KTCSRTFSSF QALGGHRASH KKPREGQKNN FKANKVHECS ICGSEFTSGQ ALGGHMRRHR TATTAVIPVA TTEVSRNSTE
201: EETENLSSYI EQRKYLPLDL NLPAPEDDLR ESKFQGIVFS TTPALIDCHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.