Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74961 | Canola | nucleus | 94.44 | 94.44 |
| CDY18446 | Canola | nucleus | 84.44 | 84.44 |
| CDX93380 | Canola | nucleus | 83.33 | 83.8 |
| CDY65670 | Canola | nucleus | 81.11 | 81.56 |
| CDY07790 | Canola | nucleus | 80.56 | 80.11 |
| AT2G37430.1 | Thale cress | nucleus | 77.78 | 78.65 |
| KRG95848 | Soybean | nucleus | 51.11 | 53.8 |
| KRH67564 | Soybean | nucleus | 51.11 | 53.18 |
| CDY52747 | Canola | nucleus | 48.33 | 51.79 |
| CDY07578 | Canola | nucleus | 48.33 | 51.79 |
| CDY30857 | Canola | nucleus | 47.22 | 50.9 |
| KRH19739 | Soybean | cytosol, nucleus | 44.44 | 50.31 |
| KRH32333 | Soybean | nucleus | 45.56 | 50.0 |
| CDX76199 | Canola | nucleus | 47.22 | 48.85 |
| KRH19742 | Soybean | nucleus | 48.33 | 47.8 |
| KRH32335 | Soybean | nucleus | 47.22 | 47.49 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 41.67 | 47.17 |
| KRH67566 | Soybean | nucleus | 41.11 | 46.84 |
| KRG95850 | Soybean | nucleus | 39.44 | 45.81 |
| CDY04582 | Canola | nucleus | 37.22 | 44.67 |
| CDY15775 | Canola | nucleus | 37.22 | 44.67 |
| CDX77198 | Canola | nucleus | 36.11 | 43.92 |
| CDY31725 | Canola | nucleus | 36.11 | 43.92 |
| CDX71073 | Canola | nucleus | 37.22 | 42.41 |
| KRH19741 | Soybean | nucleus | 41.11 | 42.05 |
| CDY09252 | Canola | nucleus | 36.67 | 42.04 |
| CDX88724 | Canola | nucleus | 36.67 | 41.51 |
| CDY31593 | Canola | nucleus | 36.11 | 40.62 |
| CDY65692 | Canola | nucleus | 35.56 | 40.0 |
| CDX80226 | Canola | nucleus | 35.56 | 39.75 |
| CDY30924 | Canola | nucleus | 36.67 | 38.82 |
| KRH32334 | Soybean | nucleus | 38.89 | 38.67 |
| CDX68366 | Canola | nucleus | 35.56 | 36.16 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 20.0 | 36.0 |
| CDY30925 | Canola | nucleus | 33.33 | 35.5 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 21.67 | 35.45 |
| CDY58688 | Canola | nucleus | 17.22 | 34.83 |
| CDX99130 | Canola | nucleus | 35.0 | 32.81 |
| CDX86044 | Canola | nucleus | 35.0 | 30.88 |
| CDY11027 | Canola | nucleus | 37.78 | 29.44 |
| CDX71375 | Canola | nucleus | 37.78 | 26.67 |
| CDY04544 | Canola | nucleus | 37.78 | 26.56 |
| CDY30501 | Canola | nucleus | 36.67 | 26.4 |
| CDY11255 | Canola | nucleus | 37.22 | 26.38 |
| CDY70037 | Canola | nucleus | 36.67 | 26.19 |
| CDX80870 | Canola | nucleus | 36.67 | 25.98 |
| CDY71034 | Canola | nucleus | 35.0 | 25.71 |
| CDY10376 | Canola | nucleus | 37.78 | 25.66 |
| CDX70302 | Canola | nucleus | 37.78 | 25.66 |
| CDY04886 | Canola | nucleus | 37.22 | 25.0 |
| CDY44371 | Canola | nucleus | 36.67 | 24.63 |
| CDY41350 | Canola | nucleus, plastid | 33.33 | 23.81 |
| CDX70228 | Canola | nucleus | 36.67 | 20.37 |
| CDY44852 | Canola | nucleus | 36.11 | 20.0 |
| CDY11288 | Canola | nucleus | 36.11 | 19.76 |
| CDY61764 | Canola | nucleus | 37.22 | 19.71 |
| CDY58436 | Canola | nucleus | 36.11 | 19.12 |
| CDY08602 | Canola | nucleus | 35.0 | 18.64 |
| CDY00945 | Canola | nucleus | 34.44 | 18.34 |
| CDX89591 | Canola | nucleus | 20.0 | 17.31 |
| CDY05027 | Canola | nucleus | 15.56 | 16.77 |
| CDY42128 | Canola | nucleus | 18.33 | 14.8 |
Protein Annotations
| EnsemblPlants:CDX91362 | EnsemblPlantsGene:GSBRNA2T00152654001 | Gene3D:3.30.160.60 | GO:A0A078DR30 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX91362 | ProteinID:CDX91362.1 | ScanProsite:PS00028 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EDDF66 | MapMan:15.5.15 | : | : | : |
Description
BnaC04g07880D
Coordinates
chrLK031867:+:253930..254472
Molecular Weight (calculated)
20445.6 Da
IEP (calculated)
9.638
GRAVY (calculated)
-0.577
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRERSEFEE SIKMSDDIAR CLMILSQTSM VKQVDVNQYT DRDTSNRFEC KTCNKRFSSF QALGGHRASH KKPKLSVDQK EVKHVTNNYN GTHMHECSIC
101: GQSFGTGQAL GGHMRRHRSS MKVEPSQLIS PVISNVPVLK RCSSSKRVLS LDLNLTPLEN DLETIFGKTF FPNIDMKFAV
101: GQSFGTGQAL GGHMRRHRSS MKVEPSQLIS PVISNVPVLK RCSSSKRVLS LDLNLTPLEN DLETIFGKTF FPNIDMKFAV
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.