Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19742 | Soybean | nucleus | 90.5 | 89.01 |
| KRG95848 | Soybean | nucleus | 60.89 | 63.74 |
| KRH19739 | Soybean | cytosol, nucleus | 56.42 | 63.52 |
| KRG95850 | Soybean | nucleus | 54.75 | 63.23 |
| KRH67566 | Soybean | nucleus | 55.31 | 62.66 |
| KRH67564 | Soybean | nucleus | 60.34 | 62.43 |
| KRH32333 | Soybean | nucleus | 55.31 | 60.37 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 49.16 | 55.35 |
| CDY07578 | Canola | nucleus | 45.25 | 48.21 |
| CDY52747 | Canola | nucleus | 45.25 | 48.21 |
| Bra003148.1-P | Field mustard | nucleus | 45.25 | 48.21 |
| CDX93380 | Canola | nucleus | 48.04 | 48.04 |
| CDY30857 | Canola | nucleus | 44.69 | 47.9 |
| CDY65670 | Canola | nucleus | 47.49 | 47.49 |
| CDX91362 | Canola | nucleus | 47.49 | 47.22 |
| CDY07790 | Canola | nucleus | 47.49 | 46.96 |
| Bra030981.1-P | Field mustard | nucleus | 47.49 | 46.96 |
| CDY18446 | Canola | nucleus | 46.93 | 46.67 |
| Bra017188.1-P | Field mustard | nucleus | 46.93 | 46.67 |
| KRH19741 | Soybean | nucleus | 45.81 | 46.59 |
| KRH29844 | Soybean | nucleus, plastid | 37.43 | 46.53 |
| Bra005197.1-P | Field mustard | nucleus | 43.02 | 46.11 |
| AT3G53600.1 | Thale cress | nucleus | 44.69 | 45.71 |
| CDX74961 | Canola | nucleus | 45.81 | 45.56 |
| AT2G37430.1 | Thale cress | nucleus | 45.25 | 45.51 |
| CDX76199 | Canola | nucleus | 44.13 | 45.4 |
| Bra039806.1-P | Field mustard | nucleus | 44.13 | 45.4 |
| KRH23029 | Soybean | nucleus | 43.02 | 45.03 |
| KRH10294 | Soybean | nucleus | 43.02 | 44.77 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 43.58 | 44.57 |
| KRH32334 | Soybean | nucleus | 44.69 | 44.2 |
| KRG90559 | Soybean | nucleus | 41.9 | 43.35 |
| KRH70509 | Soybean | nucleus | 43.58 | 43.33 |
| KRH24840 | Soybean | nucleus | 37.43 | 42.95 |
| KRH36195 | Soybean | extracellular | 41.9 | 40.54 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 21.23 | 38.0 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 22.91 | 37.27 |
| KRH67769 | Soybean | nucleus | 34.64 | 28.7 |
| KRH19960 | Soybean | nucleus | 39.11 | 24.31 |
| KRH32562 | Soybean | nucleus | 39.11 | 23.49 |
| KRH22825 | Soybean | nucleus | 40.78 | 23.17 |
| KRH26537 | Soybean | nucleus, plastid | 40.22 | 23.0 |
| KRH30555 | Soybean | nucleus | 37.99 | 22.08 |
| KRH25111 | Soybean | nucleus, plastid | 37.43 | 21.27 |
| KRG92135 | Soybean | nucleus | 38.55 | 21.1 |
| KRH34655 | Soybean | nucleus | 38.55 | 19.38 |
| KRG96047 | Soybean | mitochondrion | 38.55 | 19.11 |
Protein Annotations
| EntrezGene:100778467 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02006113 | EnsemblPlantsGene:GLYMA_10G045400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1L8M4 | InterPro:IPR013087 | EnsemblPlants:KRH32335 | ProteinID:KRH32335 | ProteinID:KRH32335.1 | PFAM:PF13912 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0001BA5578 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4040116..4040940
Molecular Weight (calculated)
20040.4 Da
IEP (calculated)
10.046
GRAVY (calculated)
-0.612
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAILKRQGE NESEETIIGL AKSLMQLSRV QQQSNKPLLK TFSPTEFECK TCNRKFSSFQ ALGGHRASHK KPKFEAEELK EEAKKTKPKM HECSICGMEF
101: SLGQALGGHM RKHRGAISEN DNNNEALSSI KQAIAKAPVL KRSNSKRVMC LEMDLNLTPL ENDLKLLFGN KAPRVDLSL
101: SLGQALGGHM RKHRGAISEN DNNNEALSSI KQAIAKAPVL KRSNSKRVMC LEMDLNLTPL ENDLKLLFGN KAPRVDLSL
001: MKRDRSDYEE SMKHIDIVES LMMLSRSFVV KQIDVKQSTG SKTNHNNHFE CKTCNRKFDS FQALGGHRAS HKKPKLIVDQ EQVKHRNKEN DMHKCTICDQ
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
101: MFGTGQALGG HMRKHRTSMI TEQSIVPSVV YSRPVFNRCS SSKEILDLNL TPLENDLVLI FGKNLVPQID LKFVN
Arabidopsis Description
At3g53600 [Source:UniProtKB/TrEMBL;Acc:Q9LFG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.