Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25111 | Soybean | nucleus, plastid | 89.61 | 87.62 |
| KRH26537 | Soybean | nucleus, plastid | 55.19 | 54.31 |
| KRH22825 | Soybean | nucleus | 55.52 | 54.29 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 44.81 | 47.75 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 11.36 | 45.45 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 10.06 | 44.93 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 10.06 | 44.93 |
| KRH67769 | Soybean | nucleus | 31.17 | 44.44 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 9.74 | 43.48 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 24.68 | 43.43 |
| KRH19739 | Soybean | cytosol, nucleus | 22.4 | 43.4 |
| KRH70509 | Soybean | nucleus | 25.0 | 42.78 |
| KRG90559 | Soybean | nucleus | 24.03 | 42.77 |
| KRH32333 | Soybean | nucleus | 22.73 | 42.68 |
| KRH29844 | Soybean | nucleus, plastid | 19.81 | 42.36 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 9.42 | 42.03 |
| KRH24840 | Soybean | nucleus | 21.1 | 41.67 |
| KRH36195 | Soybean | extracellular | 25.0 | 41.62 |
| KRH23029 | Soybean | nucleus | 23.05 | 41.52 |
| KRG95848 | Soybean | nucleus | 22.73 | 40.94 |
| KRH67565 | Soybean | cytosol, nucleus, plastid | 21.1 | 40.88 |
| KRH10294 | Soybean | nucleus | 22.73 | 40.7 |
| KRG95850 | Soybean | nucleus | 20.13 | 40.0 |
| KRH67564 | Soybean | nucleus | 22.4 | 39.88 |
| KRG92135 | Soybean | nucleus | 41.88 | 39.45 |
| KRH67566 | Soybean | nucleus | 20.13 | 39.24 |
| KRH19742 | Soybean | nucleus | 23.05 | 39.01 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 9.74 | 38.96 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 9.74 | 38.96 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 9.74 | 38.96 |
| PGSC0003DMT400001104 | Potato | nucleus | 36.69 | 38.83 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 37.01 | 38.78 |
| KRH19960 | Soybean | nucleus | 35.71 | 38.19 |
| PGSC0003DMT400018457 | Potato | nucleus | 40.58 | 37.99 |
| KRH32335 | Soybean | nucleus | 22.08 | 37.99 |
| Solyc06g074800.1.1 | Tomato | nucleus | 39.29 | 37.12 |
| KRH34655 | Soybean | nucleus | 41.56 | 35.96 |
| KRH32562 | Soybean | nucleus | 34.74 | 35.91 |
| Zm00001d036330_P001 | Maize | nucleus | 27.6 | 34.55 |
| KRH32334 | Soybean | nucleus | 19.48 | 33.15 |
| KRH19741 | Soybean | nucleus | 18.83 | 32.95 |
| KXG20985 | Sorghum | nucleus, plastid | 28.57 | 32.0 |
| KRG96047 | Soybean | mitochondrion | 36.69 | 31.3 |
| Os04t0162500-01 | Rice | vacuole | 28.57 | 30.45 |
| Zm00001d051865_P001 | Maize | nucleus | 32.47 | 30.3 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 33.77 | 30.23 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 35.06 | 29.51 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 34.74 | 29.32 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.09 | 29.09 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 34.42 | 28.88 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 31.82 | 28.66 |
| Zm00001d004439_P001 | Maize | nucleus | 32.14 | 27.58 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 31.49 | 26.58 |
| EES07783 | Sorghum | nucleus | 33.12 | 26.09 |
| Zm00001d024866_P001 | Maize | nucleus | 30.52 | 25.68 |
| EES10410 | Sorghum | nucleus | 30.52 | 23.44 |
Protein Annotations
| EntrezGene:100782408 | MapMan:15.5.15 | UniProt:A0A0R0HTT4 | EMBL:ACUP02007036 | EnsemblPlantsGene:GLYMA_11G192600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | EnsemblPlants:KRH30555 | ProteinID:KRH30555 | ProteinID:KRH30555.1 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0001BA5C3E |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:26572944..26574724
Molecular Weight (calculated)
33356.0 Da
IEP (calculated)
7.145
GRAVY (calculated)
-0.678
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMEGLDSNN STHNGIAKGK RTKRMRLLSP CGVVATTVTS STSSASSTTT YESEEEDMAN CLILLAQGGE SHHHPPRHDK QQVEDHGLEN CDGVIKTEEK
101: GNNNSDNVNA TPTATTTTAA TTKVGFYIYE CKTCNRTFPS FQALGGHRAS HKKPKLAAEE KKQPLPPPAQ PSPPSQLQHM IVTNYDRFEE GNVKSGPPIS
201: LQLGNNGNNK GKIHECSICG SEFTSGQALG GHMRRHRAST NTNTTVVDTT RCNTVSTTII TTAPPRNILQ LDLNLPAPED DIREAKFQFA TTTTQVLVGT
301: PALVDCHY
101: GNNNSDNVNA TPTATTTTAA TTKVGFYIYE CKTCNRTFPS FQALGGHRAS HKKPKLAAEE KKQPLPPPAQ PSPPSQLQHM IVTNYDRFEE GNVKSGPPIS
201: LQLGNNGNNK GKIHECSICG SEFTSGQALG GHMRRHRAST NTNTTVVDTT RCNTVSTTII TTAPPRNILQ LDLNLPAPED DIREAKFQFA TTTTQVLVGT
301: PALVDCHY
001: MEAAAEAVSA AREQSLILKG KRTKRQRPQS PIPFSIIPPM SSHEPDAEEE STSLVSKEKS LNDEINNNNI KNNNNTLING VTSSSSASSS SNNNATLKAT
101: ADEEDQDMAN CLILLAQGHS LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY VYQCKTCDRT FPSFQALGGH
201: RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP NNNSNHRSLV VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV
301: AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE DENRVNGLSF ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
101: ADEEDQDMAN CLILLAQGHS LPHLQPQPHP QQQTRQLMMS YQDSGNNNNN AYRSSSRRFL ETSSSNGTTT NGGGGRAGYY VYQCKTCDRT FPSFQALGGH
201: RASHKKPKAA MGLHSNHDHK KSNYDDAVSL HLNNVLTTTP NNNSNHRSLV VYGKGSNNKV HECGICGAEF TSGQALGGHM RRHRGAVVAA AAASTATVSV
301: AAIPATANTA LSLSPMSFDQ MSEGPIQAPV KRARSAVVSL DLDLNLPAPE DENRVNGLSF ASKQEHEQEH EQTQQKKQRE EQKSLVLSSA PTLVDCHY
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q7G8T1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.