Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- extracellular 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G095320.1 | Barley | nucleus | 17.15 | 85.51 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 16.86 | 84.06 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 16.28 | 81.16 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 16.28 | 81.16 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 16.86 | 75.32 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 16.86 | 75.32 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 16.28 | 72.73 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 67.73 | 63.49 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 66.86 | 63.01 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 66.86 | 62.84 |
| Zm00001d051865_P001 | Maize | nucleus | 56.1 | 58.48 |
| EES07783 | Sorghum | nucleus | 60.47 | 53.2 |
| GSMUA_Achr8P12900_001 | Banana | nucleus | 30.52 | 51.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.36 | 44.1 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 34.01 | 40.48 |
| KRH67769 | Soybean | nucleus | 24.71 | 39.35 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 31.4 | 39.13 |
| KRG92135 | Soybean | nucleus | 35.76 | 37.61 |
| CDY11027 | Canola | nucleus | 25.0 | 37.23 |
| PGSC0003DMT400009871 | Potato | nucleus | 31.98 | 36.91 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 32.27 | 36.76 |
| Os04t0162500-01 | Rice | vacuole | 30.52 | 36.33 |
| Os03t0820400-01 | Rice | nucleus | 15.12 | 36.11 |
| CDX80870 | Canola | nucleus | 26.16 | 35.43 |
| Solyc09g008440.1.1 | Tomato | nucleus | 31.69 | 35.16 |
| CDY04886 | Canola | nucleus | 27.33 | 35.07 |
| Bra028831.1-P | Field mustard | nucleus | 27.33 | 35.07 |
| PGSC0003DMT400001104 | Potato | nucleus | 29.36 | 34.71 |
| CDY44371 | Canola | nucleus | 26.74 | 34.33 |
| CDY41350 | Canola | nucleus, plastid | 25.0 | 34.13 |
| KRH19960 | Soybean | nucleus | 28.49 | 34.03 |
| CDY11255 | Canola | nucleus | 25.0 | 33.86 |
| KRH30555 | Soybean | nucleus | 30.23 | 33.77 |
| KRH34655 | Soybean | nucleus | 34.88 | 33.71 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 28.78 | 33.67 |
| Bra009525.1-P | Field mustard | nucleus | 25.87 | 33.58 |
| CDX70302 | Canola | nucleus | 25.87 | 33.58 |
| CDY10376 | Canola | nucleus | 25.87 | 33.58 |
| AT5G03510.1 | Thale cress | nucleus | 28.49 | 33.56 |
| Os05t0114400-01 | Rice | nucleus | 19.19 | 33.33 |
| Os01t0839100-01 | Rice | nucleus | 16.57 | 33.33 |
| KRH32562 | Soybean | nucleus | 28.78 | 33.22 |
| PGSC0003DMT400018457 | Potato | nucleus | 31.69 | 33.13 |
| Solyc06g074800.1.1 | Tomato | nucleus | 31.4 | 33.13 |
| CDY71034 | Canola | nucleus | 23.55 | 33.06 |
| Os03t0279700-01 | Rice | nucleus | 18.31 | 32.98 |
| KRH25111 | Soybean | nucleus, plastid | 29.94 | 32.7 |
| KRH22825 | Soybean | nucleus | 29.65 | 32.38 |
| Bra034116.1-P | Field mustard | plastid | 26.16 | 32.37 |
| Bra005766.1-P | Field mustard | nucleus | 25.87 | 32.25 |
| KRH26537 | Soybean | nucleus, plastid | 28.78 | 31.63 |
| CDY58436 | Canola | nucleus | 29.94 | 30.29 |
| CDY11288 | Canola | nucleus | 28.78 | 30.09 |
| Os03t0820300-01 | Rice | nucleus | 14.83 | 30.0 |
| Os01t0838600-00 | Rice | nucleus | 18.9 | 29.95 |
| CDX70228 | Canola | nucleus | 28.2 | 29.94 |
| CDY44852 | Canola | nucleus | 27.91 | 29.54 |
| Os11t0702300-00 | Rice | nucleus | 13.66 | 28.83 |
| Bra009457.1-P | Field mustard | nucleus | 28.78 | 28.7 |
| CDY61764 | Canola | nucleus | 28.2 | 28.53 |
| AT5G04390.1 | Thale cress | nucleus | 29.94 | 28.45 |
| Bra005803.1-P | Field mustard | nucleus | 29.65 | 28.41 |
| CDY08602 | Canola | nucleus | 27.33 | 27.81 |
| Bra029843.1-P | Field mustard | nucleus | 26.16 | 27.69 |
| CDY00945 | Canola | nucleus | 27.03 | 27.51 |
| KRG96047 | Soybean | mitochondrion | 28.78 | 27.42 |
| Os05t0461200-00 | Rice | cytosol | 16.28 | 27.18 |
| Solyc05g055500.1.1 | Tomato | nucleus | 28.49 | 27.07 |
| Bra028791.1-P | Field mustard | nucleus | 27.33 | 26.7 |
| PGSC0003DMT400079773 | Potato | nucleus | 28.49 | 26.63 |
| AT3G10470.1 | Thale cress | nucleus | 30.23 | 26.13 |
| Os05t0460900-00 | Rice | cytosol | 13.08 | 25.86 |
| CDX89591 | Canola | nucleus | 14.83 | 24.52 |
| Os11t0702400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 11.92 | 24.12 |
| CDY42128 | Canola | nucleus | 13.66 | 21.08 |
| CDY05027 | Canola | nucleus | 9.59 | 19.76 |
Protein Annotations
| EntrezGene:107277956 | MapMan:15.5.15 | ProteinID:BAD22859.1 | ProteinID:BAD22927.1 | ProteinID:BAS81665.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | EnsemblPlantsGene:Os02g0823900 | EnsemblPlants:Os02t0823900-00 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | UniProt:Q6K9W9 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00003B0471 |
| RefSeq:XP_015623775.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
OsSTA83Hypothetical conserved gene. (Os02t0823900-00)
Coordinates
chr2:-:35389604..35390638
Molecular Weight (calculated)
35858.5 Da
IEP (calculated)
8.095
GRAVY (calculated)
-0.362
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MQATDHADTE RALAFVAMSV EDKHAGVVKR KRTKRPRHHA APASSSESTT TEEEDMAHCL ILLAQGAAVV DSKPSTPAPP PPPPAQPPVL AAPAPAPPPP
101: QPPVVVVKSE RYTSRKYTEA ATTADGVRAG FYVYECKTCN KCFPTFQALG GHRASHKKPR LPGADDDNVN NVTNTNAIVV KSKPPLTTTT TPSAPSPPPP
201: QADAVVVPDV TTVLSLNNVA AAGSIINKLR VHECSICGAE FGSGQALGGH MRRHRPLHAP PERAATTAAT TAATATAPDT KKEGSTSINL ELDLNLPAPS
301: DEESVSPPPP PPPPVLLALG GQFNDGKKPI LQLTASAALV GCHY
101: QPPVVVVKSE RYTSRKYTEA ATTADGVRAG FYVYECKTCN KCFPTFQALG GHRASHKKPR LPGADDDNVN NVTNTNAIVV KSKPPLTTTT TPSAPSPPPP
201: QADAVVVPDV TTVLSLNNVA AAGSIINKLR VHECSICGAE FGSGQALGGH MRRHRPLHAP PERAATTAAT TAATATAPDT KKEGSTSINL ELDLNLPAPS
301: DEESVSPPPP PPPPVLLALG GQFNDGKKPI LQLTASAALV GCHY
001: MEAFEEATKE QSLILKGKRT KRQRPQSPIP FSISPPIVST PENNMEEEYT DLDSKDNALG NDEGNHKKDG VITSSSSSAS WSSQNNHTLK AAEDEEDQDI
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84K31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.