Factsheet for Os03t0279700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G203400.1	Wheat	nucleus	70.16	73.22
TraesCS4A01G101000.1	Wheat	nucleus	69.63	73.08
TraesCS4D01G204300.1	Wheat	nucleus	68.06	71.82
HORVU4Hr1G058720.1	Barley	nucleus	70.16	71.66
HORVU4Hr1G058690.1	Barley	nucleus	67.02	68.09
EER92453	Sorghum	nucleus	69.63	67.51
Zm00001d028667_P001	Maize	nucleus	63.87	67.03
TraesCS4A01G101100.1	Wheat	nucleus	65.97	65.97
Zm00001d047786_P001	Maize	nucleus	63.35	60.8
GSMUA_Achr9P03210_001	Banana	nucleus	38.74	52.86
PGSC0003DMT400060523	Potato	mitochondrion	35.6	49.28
Solyc05g054650.1.1	Tomato	plastid	36.13	45.39
Os05t0114400-01	Rice	nucleus	46.6	44.95
KRH01600	Soybean	cytosol, extracellular, nucleus	40.84	44.57
VIT_06s0004g04180.t01	Wine grape	nucleus	36.65	44.03
KRH70509	Soybean	nucleus	41.36	43.89
VIT_13s0019g00480.t01	Wine grape	nucleus	39.27	42.61
KRG90559	Soybean	nucleus	38.22	42.2
Solyc05g054660.1.1	Tomato	nucleus, plastid	35.08	40.12
KRH36195	Soybean	extracellular	38.22	39.46
Os01t0839100-01	Rice	nucleus	29.84	33.33
Os01t0838600-00	Rice	nucleus	35.6	31.34
PGSC0003DMT400060463	Potato	nucleus	34.03	31.25
Os03t0820400-01	Rice	nucleus	23.56	31.25
Os05t0461200-00	Rice	cytosol	33.51	31.07
Os11t0702300-00	Rice	nucleus	23.56	27.61
Os03t0820300-01	Rice	nucleus	24.08	27.06
Os11t0702400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	23.04	25.88
Os05t0460900-00	Rice	cytosol	21.99	24.14
Os04t0162500-01	Rice	vacuole	35.08	23.18
Os02t0823900-00	Rice	cytosol, nucleus, peroxisome	32.98	18.31

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:4332436	ProteinID:ABF95297.1	EMBL:AK111338	ProteinID:BAF11648.1
ProteinID:BAS83557.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR013087	EnsemblPlantsGene:Os03g0279700	EnsemblPlants:Os03t0279700-01
PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF162	UniProt:Q10N75
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0000DB4D1E	RefSeq:XP_015630125.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

Similar to ZPT2-12. (Os03t0279700-01)

Coordinates

chr3:-:9524919..9525850

Molecular Weight (calculated)

19709.6 Da

IEP (calculated)

7.099

GRAVY (calculated)

-0.126

Length

191 amino acids

Sequence
(BLAST)

001: MAYGKRPRQQ AEEAAFSLFD SSDMARIMLL FSGAHGGGGG AAAASPPERM FECKTCNRQF PSFQALGGHR ASHKKPRLAD GDPAAEAPAK PKVHGCSICG
101: LEFAVGQALG GHMRRHRAVM ADGLGLGLSL GLGIGVVGQS DDDGGKKKAA AAAAAAELVF DLNAPAIEEE PDRARPAGLA VEFPVVVDFP C

Best Arabidopsis Sequence Match ( AT2G28710.1 )
(BLAST)

001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF

Arabidopsis Description

At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.