Factsheet for Os01t0839100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87825	Sorghum	nucleus	72.51	66.67
TraesCS3A01G356600.1	Wheat	nucleus	70.76	63.35
TraesCS3B01G389400.1	Wheat	nucleus	70.76	61.73
Zm00001d012427_P001	Maize	nucleus	59.06	59.76
TraesCS3D01G350700.1	Wheat	nucleus	64.33	58.51
Zm00001d042933_P001	Maize	nucleus	61.4	57.69
PGSC0003DMT400060523	Potato	mitochondrion	30.99	38.41
Solyc05g054650.1.1	Tomato	plastid	31.58	35.53
Os03t0820400-01	Rice	nucleus	28.66	34.03
VIT_06s0004g04180.t01	Wine grape	nucleus	30.99	33.33
VIT_13s0019g00480.t01	Wine grape	nucleus	33.92	32.95
KRG90559	Soybean	nucleus	32.75	32.37
Solyc05g054660.1.1	Tomato	nucleus, plastid	30.99	31.74
Os05t0460900-00	Rice	cytosol	32.16	31.61
KRH01600	Soybean	cytosol, extracellular, nucleus	32.16	31.43
Os11t0702300-00	Rice	nucleus	29.82	31.29
KRH36195	Soybean	extracellular	32.75	30.27
KRH70509	Soybean	nucleus	31.58	30.0
Os03t0279700-01	Rice	nucleus	33.33	29.84
Os03t0820300-01	Rice	nucleus	28.66	28.82
Os05t0461200-00	Rice	cytosol	34.5	28.64
Os11t0702400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	26.9	27.06
Os05t0114400-01	Rice	nucleus	30.99	26.77
Os01t0838600-00	Rice	nucleus	32.16	25.35
PGSC0003DMT400060463	Potato	nucleus	29.24	24.04
Os04t0162500-01	Rice	vacuole	33.33	19.72
Os02t0823900-00	Rice	cytosol, nucleus, peroxisome	33.33	16.57

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:9272517	EMBL:AK108227	ProteinID:BAD81699.1	ProteinID:BAD81750.1
ProteinID:BAS75140.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0030312
GO:GO:0030599	GO:GO:0042545	GO:GO:0045330	GO:GO:0045490	InterPro:IPR013087	EnsemblPlantsGene:Os01g0839100
EnsemblPlants:Os01t0839100-01	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF206
UniProt:Q5NA09	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00000AACC2	RefSeq:XP_015634661.1	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

ZINC FINGER PROTEIN 179Zinc finger, C2H2 domain containing protein. (Os01t0839100-01)

Coordinates

chr1:+:36001242..36002101

Molecular Weight (calculated)

17945.9 Da

IEP (calculated)

5.023

GRAVY (calculated)

-0.375

Length

171 amino acids

Sequence
(BLAST)

001: MTITREEAES KEMESLRVHA SALLSLSSPA ASASQPTSSS STTEGVFECK TCSKRFPSFQ ALGGHRTSHT RLQAKLLSDP AAAAAAAAER DRARVHECAV
101: CGVEFSMGQA LGGHMRRHRG ETGTTTVVLA DADDSGGATV PQPPEPMPDL NYPPLEDAGD GSEPELLNLL V

Best Arabidopsis Sequence Match ( AT3G46080.1 )
(BLAST)

001: MVARSEEVEI VEDTAAKCLM LLSRVGECGG GGEKRVFRCK TCLKEFSSFQ ALGGHRASHK KLINSSDPSL LGSLSNKKTK TATSHPCPIC GVEFPMGQAL
101: GGHMRRHRSE KASPGTLVTR SFLPETTTVT TLKKSSSGKR VACLDLDSME SLVNWKLELG RTIS

Arabidopsis Description

ZAT8Zinc finger protein ZAT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX85]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.