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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 5
  • plastid 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g054650.1.1 Tomato plastid 81.44 89.47
PGSC0003DMT400060523 Potato mitochondrion 71.26 86.23
VIT_06s0004g04180.t01 Wine grape nucleus 54.49 57.23
KRG90559 Soybean nucleus 55.09 53.18
GSMUA_Achr9P03210_001 Banana nucleus 43.71 52.14
VIT_13s0019g00480.t01 Wine grape nucleus 54.49 51.7
KRH36195 Soybean extracellular 55.09 49.73
Solyc06g075780.1.1 Tomato nucleus 43.11 46.75
GSMUA_Achr10P... Banana nucleus 47.31 44.38
GSMUA_Achr5P29140_001 Banana nucleus 46.11 44.25
GSMUA_Achr11P... Banana nucleus 38.92 43.05
Solyc11g073060.1.1 Tomato nucleus 39.52 42.86
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus 38.92 42.76
GSMUA_Achr5P28550_001 Banana nucleus 43.71 42.69
TraesCS4D01G204300.1 Wheat nucleus 43.71 40.33
TraesCS4A01G101000.1 Wheat nucleus 43.11 39.56
HORVU4Hr1G058690.1 Barley nucleus 44.31 39.36
TraesCS4B01G203400.1 Wheat nucleus 43.11 39.34
HORVU4Hr1G058720.1 Barley nucleus 43.71 39.04
GSMUA_Achr6P33180_001 Banana nucleus 31.14 38.81
Zm00001d028667_P001 Maize nucleus 41.92 38.46
TraesCS4A01G101100.1 Wheat nucleus 43.11 37.7
GSMUA_Achr11P... Banana nucleus 31.74 37.59
TraesCS5D01G489800.1 Wheat nucleus 35.33 37.58
TraesCS1A01G040300.1 Wheat nucleus 42.52 37.57
TraesCS1B01G053100.1 Wheat nucleus 42.52 37.57
TraesCS1B01G053200.1 Wheat nucleus 42.52 37.57
TraesCS1A01G040100.1 Wheat nucleus 38.32 37.43
EER90627 Sorghum cytosol, mitochondrion, nucleus 32.34 36.99
TraesCS5B01G489400.1 Wheat nucleus 35.33 36.88
TraesCS1D01G041500.1 Wheat nucleus 41.32 36.7
HORVU1Hr1G006910.1 Barley nucleus 41.92 36.46
TraesCS3A01G356100.1 Wheat nucleus 44.31 36.27
TraesCS1D01G041600.1 Wheat nucleus 41.32 36.13
TraesCS5A01G476500.1 Wheat nucleus 34.13 36.08
Os05t0114400-01 Rice nucleus 42.52 35.86
Zm00001d012967_P001 Maize plastid 26.95 35.71
Os01t0838600-00 Rice nucleus 46.11 35.48
Zm00001d035609_P001 Maize nucleus 41.92 35.35
Zm00001d034639_P001 Maize nucleus 31.74 35.33
TraesCS1B01G053000.1 Wheat nucleus 40.12 35.26
TraesCS1D01G041700.1 Wheat nucleus 40.12 35.26
HORVU5Hr1G112820.1 Barley nucleus 33.53 35.22
HORVU1Hr1G006920.1 Barley nucleus 38.32 35.16
KXG21109 Sorghum nucleus 42.52 35.15
TraesCS3D01G350100.1 Wheat nucleus 42.52 35.15
Os03t0279700-01 Rice nucleus 40.12 35.08
EER92453 Sorghum nucleus 41.32 35.03
HORVU3Hr1G086790.2 Barley nucleus 41.32 34.85
Zm00001d047786_P001 Maize nucleus 41.32 34.67
TraesCS3B01G389000.1 Wheat nucleus 43.11 34.62
TraesCS5D01G491300.1 Wheat nucleus 27.54 34.59
TraesCS5A01G477500.1 Wheat nucleus 28.14 34.31
TraesCS5D01G491100.1 Wheat nucleus 27.54 34.07
HORVU3Hr1G086840.1 Barley nucleus 41.32 33.82
TraesCS5A01G477600.1 Wheat nucleus 27.54 33.82
TraesCS5A01G478000.1 Wheat nucleus 26.95 33.58
HORVU5Hr1G112940.1 Barley nucleus 27.54 33.58
TraesCS5B01G490900.1 Wheat nucleus 27.54 33.58
Os03t0820400-01 Rice nucleus 28.74 33.33
TraesCS5A01G478200.1 Wheat nucleus 26.95 33.33
Zm00001d012430_P001 Maize nucleus 41.92 33.18
TraesCS5B01G490700.1 Wheat nucleus 26.95 33.09
TraesCS5B01G491100.1 Wheat nucleus 26.95 33.09
TraesCS5B01G490400.1 Wheat nucleus 26.35 33.08
TraesCS5D01G490700.1 Wheat nucleus 26.35 33.08
TraesCS1A01G040200.1 Wheat nucleus 39.52 33.0
TraesCS5A01G477200.1 Wheat mitochondrion, nucleus 26.35 32.59
TraesCS5D01G490800.1 Wheat nucleus 25.75 32.33
Zm00001d038379_P001 Maize nucleus 35.93 32.26
TraesCS5A01G477800.1 Wheat nucleus 26.35 32.12
TraesCS5D01G491700.1 Wheat nucleus 26.35 32.12
TraesCS5B01G490500.1 Wheat nucleus 25.75 32.09
TraesCS5A01G477100.1 Wheat nucleus 25.75 31.85
TraesCS5B01G491300.1 Wheat nucleus 25.75 31.62
TraesCS5D01G490900.1 Wheat nucleus 25.75 31.62
TraesCS3D01G350200.1 Wheat nucleus 38.32 31.07
Zm00001d034642_P001 Maize nucleus, plastid 26.95 31.03
Os01t0839100-01 Rice nucleus 31.74 30.99
Zm00001d012427_P001 Maize nucleus 31.14 30.77
HORVU5Hr1G045780.1 Barley nucleus 25.75 30.71
HORVU5Hr1G113070.1 Barley nucleus 25.75 30.71
HORVU5Hr1G113130.1 Barley nucleus 25.75 30.71
Zm00001d042934_P001 Maize nucleus 41.32 30.67
TraesCS1A01G286100.1 Wheat nucleus 32.93 30.56
EES03852 Sorghum cytosol 41.92 30.3
TraesCS5D01G026400.1 Wheat nucleus 24.55 30.15
Os05t0461200-00 Rice cytosol 37.13 30.1
Solyc03g093870.1.1 Tomato nucleus 31.14 29.89
EER93193 Sorghum cytosol, nucleus, plastid 26.35 29.53
TraesCS5B01G491000.1 Wheat nucleus 28.14 29.19
EES18355 Sorghum nucleus 36.53 29.19
TraesCS5A01G477900.1 Wheat nucleus 28.74 28.4
HORVU1Hr1G021410.1 Barley plastid 26.35 28.39
TraesCS5A01G477300.1 Wheat nucleus 19.16 28.32
TraesCS5D01G490500.1 Wheat nucleus 28.74 28.24
TraesCS5D01G491200.1 Wheat nucleus 27.54 28.22
GSMUA_Achr10P... Banana nucleus 31.74 28.19
TraesCS3B01G389100.1 Wheat nucleus 43.11 28.02
TraesCS5A01G478300.1 Wheat nucleus 27.54 27.88
TraesCS5A01G478100.1 Wheat nucleus 28.14 27.81
TraesCS5B01G490300.1 Wheat nucleus 26.95 27.78
TraesCS5D01G490300.1 Wheat nucleus 27.54 27.71
TraesCSU01G075000.1 Wheat nucleus 27.54 27.71
TraesCS5D01G490600.1 Wheat nucleus 28.14 27.65
TraesCS5B01G490800.1 Wheat nucleus 28.14 27.49
OQU87825 Sorghum nucleus 30.54 27.42
TraesCS5D01G491400.1 Wheat nucleus 27.54 27.38
TraesCS5D01G491500.1 Wheat nucleus 28.14 27.33
TraesCS5D01G026300.1 Wheat nucleus 28.14 27.17
TraesCS5D01G491600.1 Wheat nucleus 28.14 27.17
TraesCS5B01G490100.1 Wheat nucleus 28.74 27.12
Os03t0820300-01 Rice nucleus 27.54 27.06
TraesCS5D01G490200.1 Wheat nucleus 27.54 27.06
Os11t0702300-00 Rice nucleus 26.35 26.99
Zm00001d042933_P001 Maize nucleus 29.34 26.92
TraesCS3A01G356200.1 Wheat nucleus 40.12 26.91
TraesCS5A01G476900.1 Wheat nucleus 28.14 26.86
TraesCS5B01G489800.1 Wheat nucleus 28.14 26.86
Zm00001d012968_P001 Maize nucleus 28.14 26.86
EER93194 Sorghum nucleus, plastid 29.34 26.78
TraesCS4A01G174100.1 Wheat nucleus 25.15 26.75
TraesCS5A01G478400.1 Wheat nucleus 25.15 26.75
HORVU5Hr1G113090.1 Barley nucleus 27.54 26.74
TraesCS5A01G477400.1 Wheat nucleus 28.14 26.7
TraesCS3A01G356600.1 Wheat nucleus 30.54 26.7
TraesCS3D01G350700.1 Wheat nucleus 29.94 26.6
Zm00001d034641_P001 Maize nucleus 27.54 26.59
TraesCS5B01G490000.1 Wheat nucleus 28.14 26.55
TraesCS4D01G141500.1 Wheat nucleus 25.15 26.42
TraesCS5A01G477000.1 Wheat nucleus 28.14 26.4
TraesCS5D01G491000.1 Wheat nucleus 28.14 26.4
TraesCS5B01G491200.1 Wheat nucleus 28.74 26.37
HORVU5Hr1G112900.1 Barley nucleus 28.74 26.23
TraesCS5D01G490400.1 Wheat nucleus 27.54 25.99
HORVU5Hr1G112870.1 Barley nucleus 29.94 25.91
TraesCS3B01G389400.1 Wheat nucleus 29.34 25.0
Os11t0702400-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 25.15 24.71
Solyc11g066400.1.1 Tomato nucleus, plastid 43.11 24.49
HORVU5Hr1G112970.1 Barley nucleus 27.54 24.21
HORVU6Hr1G052990.1 Barley cytosol, mitochondrion, nucleus 13.17 24.18
Os05t0460900-00 Rice cytosol 25.15 24.14
Zm00001d045211_P001 Maize nucleus 25.15 23.6
EES10296 Sorghum plastid 25.75 23.5
TraesCS5B01G490600.1 Wheat nucleus 28.14 23.38
Solyc09g008440.1.1 Tomato nucleus 40.12 21.61
Solyc06g074800.1.1 Tomato nucleus 41.92 21.47
HORVU5Hr1G112930.1 Barley nucleus 26.95 20.83
HORVU5Hr1G045760.1 Barley nucleus 27.54 20.0
TraesCS1B01G295400.1 Wheat nucleus 27.54 19.41
TraesCS4B01G143400.1 Wheat nucleus 18.56 19.14
TraesCS1A01G285900.1 Wheat nucleus 27.54 19.09
OQU84076 Sorghum nucleus 25.75 18.78
Solyc05g055500.1.1 Tomato nucleus 38.32 17.68
Protein Annotations
MapMan:15.5.15Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0008150GO:GO:0009719GO:GO:0010200
InterPro:IPR013087UniProt:K4C2E3PFAM:PF13912ScanProsite:PS00028PFscan:PS50157PANTHER:PTHR26374
PANTHER:PTHR26374:SF162SMART:SM00355SUPFAM:SSF57667EnsemblPlantsGene:Solyc05g054660.1EnsemblPlants:Solyc05g054660.1.1UniParc:UPI0002766CB3
InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typeSEG:seg:::
Description
No Description!
Coordinates
chr5:-:64525923..64526426
Molecular Weight (calculated)
19149.8 Da
IEP (calculated)
9.774
GRAVY (calculated)
-0.950
Length
167 amino acids
Sequence
(BLAST)
001: MTNYLMLFSS QENHFNTMVN NSPNRVFECK TCNRQFSSFQ ALGGHRASHK KPRLMGEMNF HLPISPPKPK THECSICGLE FPIGQALGGH MRRHRGMLNE
101: NNNNNNNNNN NNNNNNNNNN NNNNNNVLKK LKNPRVLCLD LNLTPLENDH LELIKLKKEA PKVDCFL
Best Arabidopsis Sequence Match ( AT2G28710.1 )
(BLAST)
001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
Arabidopsis Description
At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.