Factsheet for Zm00001d012968_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034641_P001	Maize	nucleus	69.71	70.52
EER93194	Sorghum	nucleus, plastid	70.86	67.76
TraesCS5B01G491000.1	Wheat	nucleus	56.57	61.49
TraesCS5A01G478300.1	Wheat	nucleus	57.71	61.21
TraesCS5D01G490300.1	Wheat	nucleus	57.71	60.84
Zm00001d012967_P001	Maize	plastid	42.86	59.52
TraesCS5D01G491500.1	Wheat	nucleus	58.29	59.3
TraesCS5D01G490500.1	Wheat	nucleus	56.57	58.24
TraesCS5A01G477400.1	Wheat	nucleus	58.29	57.95
HORVU5Hr1G112900.1	Barley	nucleus	60.57	57.92
TraesCS5D01G491200.1	Wheat	nucleus	53.71	57.67
TraesCS5D01G490200.1	Wheat	nucleus	56.0	57.65
TraesCS5D01G491000.1	Wheat	nucleus	58.29	57.3
TraesCS5A01G476900.1	Wheat	nucleus	57.14	57.14
TraesCS5B01G491200.1	Wheat	nucleus	59.43	57.14
Os03t0820300-01	Rice	nucleus	55.43	57.06
TraesCS5A01G478100.1	Wheat	nucleus	54.86	56.8
TraesCSU01G075000.1	Wheat	nucleus	53.71	56.63
HORVU5Hr1G113090.1	Barley	nucleus	55.43	56.4
TraesCS5A01G477900.1	Wheat	nucleus	54.29	56.21
TraesCS5B01G490800.1	Wheat	nucleus	54.86	56.14
TraesCS5D01G491600.1	Wheat	nucleus	55.43	56.07
TraesCS5B01G489800.1	Wheat	nucleus	56.0	56.0
TraesCS5D01G491400.1	Wheat	nucleus	53.71	55.95
Zm00001d034642_P001	Maize	nucleus, plastid	46.29	55.86
TraesCS5D01G026300.1	Wheat	nucleus	54.86	55.49
TraesCS5A01G477000.1	Wheat	nucleus	55.43	54.49
TraesCS5D01G490600.1	Wheat	nucleus	52.57	54.12
TraesCS5B01G490300.1	Wheat	nucleus	49.71	53.7
TraesCS5D01G490400.1	Wheat	nucleus	54.29	53.67
TraesCS5B01G490100.1	Wheat	nucleus	53.14	52.54
TraesCS5B01G490000.1	Wheat	nucleus	52.0	51.41
TraesCS5B01G490600.1	Wheat	nucleus	58.86	51.24
HORVU5Hr1G112970.1	Barley	nucleus	55.43	51.05
HORVU5Hr1G112870.1	Barley	nucleus	56.0	50.78
HORVU5Hr1G045760.1	Barley	nucleus	55.43	42.17
PGSC0003DMT400060523	Potato	mitochondrion	26.86	34.06
Zm00001d034639_P001	Maize	nucleus	26.86	31.33
Solyc05g054650.1.1	Tomato	plastid	26.86	30.92
VIT_06s0004g04180.t01	Wine grape	nucleus	28.0	30.82
Zm00001d045211_P001	Maize	nucleus	30.86	30.34
Zm00001d012427_P001	Maize	nucleus	28.0	28.99
Solyc05g054660.1.1	Tomato	nucleus, plastid	26.86	28.14
KRH01600	Soybean	cytosol, extracellular, nucleus	28.0	28.0
VIT_13s0019g00480.t01	Wine grape	nucleus	28.0	27.84
KRH70509	Soybean	nucleus	28.57	27.78
KRG90559	Soybean	nucleus	27.43	27.75
Zm00001d042933_P001	Maize	nucleus	28.57	27.47
KRH36195	Soybean	extracellular	28.0	26.49
Zm00001d028667_P001	Maize	nucleus	26.86	25.82
Zm00001d035609_P001	Maize	nucleus	29.14	25.76
Zm00001d047786_P001	Maize	nucleus	27.43	24.12
Zm00001d038379_P001	Maize	nucleus	25.14	23.66
Zm00001d012430_P001	Maize	nucleus	28.0	23.22
Zm00001d042934_P001	Maize	nucleus	27.43	21.33
PGSC0003DMT400060463	Potato	nucleus	25.14	21.15
Zm00001d036330_P001	Maize	nucleus	29.71	21.14
Zm00001d051865_P001	Maize	nucleus	29.71	15.76
Zm00001d024866_P001	Maize	nucleus	31.43	15.03
Zm00001d004439_P001	Maize	nucleus	29.71	14.48

Protein Annotations

EnsemblPlants:Zm00001d012968_P001	EnsemblPlants:Zm00001d012968_T001	EnsemblPlantsGene:Zm00001d012968	EntrezGene:103625765	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374
PANTHER:PTHR26374:SF166	PFAM:PF13912	PFscan:PS50157	ProteinID:AQK61917.1	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00022149E3	UniProt:A0A1D6GE74	MapMan:15.5.15	:

Description

ZFP16-2

Coordinates

chr5:-:2459657..2460184

Molecular Weight (calculated)

18395.5 Da

IEP (calculated)

8.395

GRAVY (calculated)

-0.581

Length

175 amino acids

Sequence
(BLAST)

001: MTHPRPDHEP AGEVSLALAL STDSSGGSAG APAAKRARRR GAAAATSGEG EFVCRTCSRA FTSFQALGGH RTSHLRGRHG LELGVGARAL SRQQHKHHQQ
101: AGDGGGGDRE PLAQHECHVC GLGFEMGQAL GGHMRRHREE TTTGAADAWV WRADDALQRA RGGAADPPVL LELFA

Best Arabidopsis Sequence Match ( AT2G28200.1 )
(BLAST)

001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY

Arabidopsis Description

ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.