Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024866_P001 | Maize | nucleus | 75.77 | 74.32 |
| EES10410 | Sorghum | nucleus | 80.22 | 71.82 |
| GSMUA_Achr1P06720_001 | Banana | nucleus | 23.96 | 56.95 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 51.81 | 54.39 |
| Os04t0162500-01 | Rice | vacuole | 42.34 | 52.6 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 52.92 | 52.05 |
| CDY11027 | Canola | nucleus | 28.13 | 43.72 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 31.2 | 40.58 |
| CDY11255 | Canola | nucleus | 28.69 | 40.55 |
| CDX80870 | Canola | nucleus | 28.69 | 40.55 |
| CDY10376 | Canola | nucleus | 29.8 | 40.38 |
| CDY04886 | Canola | nucleus | 30.08 | 40.3 |
| KRH67769 | Soybean | nucleus | 24.23 | 40.28 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 32.31 | 40.14 |
| Bra009525.1-P | Field mustard | nucleus | 29.53 | 40.0 |
| CDX70302 | Canola | nucleus | 29.53 | 40.0 |
| Bra028831.1-P | Field mustard | nucleus | 29.8 | 39.93 |
| CDY44371 | Canola | nucleus | 29.53 | 39.55 |
| Bra005766.1-P | Field mustard | nucleus | 29.8 | 38.77 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 32.31 | 38.41 |
| AT5G03510.1 | Thale cress | nucleus | 31.2 | 38.36 |
| Zm00001d036330_P001 | Maize | nucleus | 25.63 | 37.4 |
| Zm00001d034639_P001 | Maize | nucleus | 15.6 | 37.33 |
| Zm00001d012967_P001 | Maize | plastid | 12.81 | 36.51 |
| KRH19960 | Soybean | nucleus | 29.25 | 36.46 |
| PGSC0003DMT400018457 | Potato | nucleus | 32.87 | 35.87 |
| Zm00001d034642_P001 | Maize | nucleus, plastid | 14.48 | 35.86 |
| PGSC0003DMT400001104 | Potato | nucleus | 28.97 | 35.74 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 29.25 | 35.71 |
| Zm00001d051865_P001 | Maize | nucleus | 32.59 | 35.45 |
| Solyc06g074800.1.1 | Tomato | nucleus | 32.03 | 35.28 |
| KRH32562 | Soybean | nucleus | 29.25 | 35.23 |
| CDY71034 | Canola | nucleus | 23.68 | 34.69 |
| Zm00001d028667_P001 | Maize | nucleus | 17.55 | 34.62 |
| KRG92135 | Soybean | nucleus | 31.2 | 34.25 |
| Solyc09g008440.1.1 | Tomato | nucleus | 29.53 | 34.19 |
| PGSC0003DMT400009871 | Potato | nucleus | 28.13 | 33.89 |
| KRH25111 | Soybean | nucleus, plastid | 28.69 | 32.7 |
| Zm00001d047786_P001 | Maize | nucleus | 18.11 | 32.66 |
| CDX70228 | Canola | nucleus | 29.25 | 32.41 |
| CDY44852 | Canola | nucleus | 29.25 | 32.31 |
| KRH26537 | Soybean | nucleus, plastid | 28.13 | 32.27 |
| CDY11288 | Canola | nucleus | 29.53 | 32.22 |
| KRH30555 | Soybean | nucleus | 27.58 | 32.14 |
| KRH22825 | Soybean | nucleus | 28.13 | 32.06 |
| Zm00001d012427_P001 | Maize | nucleus | 15.04 | 31.95 |
| KRH34655 | Soybean | nucleus | 31.48 | 31.74 |
| CDY58436 | Canola | nucleus | 29.8 | 31.47 |
| CDY41350 | Canola | nucleus, plastid | 22.01 | 31.35 |
| Zm00001d035609_P001 | Maize | nucleus | 16.99 | 30.81 |
| CDY08602 | Canola | nucleus | 28.69 | 30.47 |
| CDY00945 | Canola | nucleus | 28.69 | 30.47 |
| Bra009457.1-P | Field mustard | nucleus | 29.25 | 30.43 |
| Bra005803.1-P | Field mustard | nucleus | 30.36 | 30.36 |
| CDY61764 | Canola | nucleus | 28.69 | 30.29 |
| Zm00001d012430_P001 | Maize | nucleus | 17.55 | 29.86 |
| AT5G04390.1 | Thale cress | nucleus | 30.08 | 29.83 |
| Zm00001d012968_P001 | Maize | nucleus | 14.48 | 29.71 |
| Zm00001d034641_P001 | Maize | nucleus | 14.21 | 29.48 |
| KRG96047 | Soybean | mitochondrion | 29.53 | 29.36 |
| Bra028791.1-P | Field mustard | nucleus | 28.69 | 29.26 |
| Bra034116.1-P | Field mustard | plastid | 22.56 | 29.14 |
| Zm00001d042933_P001 | Maize | nucleus | 14.48 | 28.57 |
| Zm00001d042934_P001 | Maize | nucleus | 17.83 | 28.44 |
| Bra029843.1-P | Field mustard | nucleus | 25.63 | 28.31 |
| Zm00001d038379_P001 | Maize | nucleus | 14.48 | 27.96 |
| AT3G10470.1 | Thale cress | nucleus | 30.64 | 27.64 |
| Solyc05g055500.1.1 | Tomato | nucleus | 27.58 | 27.35 |
| PGSC0003DMT400079773 | Potato | nucleus | 27.02 | 26.36 |
| CDX89591 | Canola | nucleus | 15.04 | 25.96 |
| Zm00001d045211_P001 | Maize | nucleus | 12.81 | 25.84 |
| CDY42128 | Canola | nucleus | 14.48 | 23.32 |
| CDY05027 | Canola | nucleus | 9.19 | 19.76 |
Protein Annotations
| EnsemblPlants:Zm00001d004439_P001 | EnsemblPlants:Zm00001d004439_T001 | EnsemblPlantsGene:Zm00001d004439 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | PFAM:PF13912 |
| PFscan:PS50157 | ProteinID:ONM18919.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0002220FE3 | UniProt:A0A1D6EFF5 | MapMan:15.5.15 | : | : | : |
Description
C2H2-type zinc finger family protein
Coordinates
chr2:-:112049178..112050257
Molecular Weight (calculated)
36577.8 Da
IEP (calculated)
6.285
GRAVY (calculated)
-0.357
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVQEKEAG MPPAMAVPPV LVKGKRSKRQ RVHAPPVVAV AVAAAAEWSS SSAASPAGGD DSGSGTATSP SAADDAEAEA ASAGCCLLTE EDEDMALCLM
101: LLAHGEPARD DGGGGNGKTA AKEASSRFRS RRPAAAGDGE YVYECKTCNK CFPSFQALGG HRTSHKKPRL LLLPPVPSQP TQEKDLGLVP TPNPAAAETA
201: EASPPPAAPA EAAADATALA IPVAAAPKQE GQAAAAVATS STSNSSSGGA KQPHHRPRVH ECSICGAEFG SGQALGGHMR RHRPLVPAGA RERDDAHAPS
301: RKEKSLLELD LNMPAPCDEA EADAPAVTSP RFAFAVAERP PAPLLFPPAT PSALVDCHY
101: LLAHGEPARD DGGGGNGKTA AKEASSRFRS RRPAAAGDGE YVYECKTCNK CFPSFQALGG HRTSHKKPRL LLLPPVPSQP TQEKDLGLVP TPNPAAAETA
201: EASPPPAAPA EAAADATALA IPVAAAPKQE GQAAAAVATS STSNSSSGGA KQPHHRPRVH ECSICGAEFG SGQALGGHMR RHRPLVPAGA RERDDAHAPS
301: RKEKSLLELD LNMPAPCDEA EADAPAVTSP RFAFAVAERP PAPLLFPPAT PSALVDCHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.