Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400003538 | |
| PGSC0003DMT400003545 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G04390.1 | PGSC0003DMT400003538 | AT3G01320.1 | 19962994 |
| AT5G04390.1 | PGSC0003DMT400003545 | AT3G01320.1 | 19962994 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008440.1.1 | Tomato | nucleus | 92.62 | 89.03 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 45.64 | 49.28 |
| KRH67769 | Soybean | nucleus | 33.89 | 46.76 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 21.48 | 46.38 |
| CDY11027 | Canola | nucleus | 34.23 | 44.16 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 24.16 | 43.11 |
| PGSC0003DMT400040143 | Potato | nucleus | 23.83 | 42.77 |
| PGSC0003DMT400040144 | Potato | nucleus | 23.49 | 42.42 |
| KRH19960 | Soybean | nucleus | 40.6 | 42.01 |
| Bra028831.1-P | Field mustard | nucleus | 37.58 | 41.79 |
| CDY04886 | Canola | nucleus | 37.58 | 41.79 |
| Bra009525.1-P | Field mustard | nucleus | 36.91 | 41.51 |
| CDX70302 | Canola | nucleus | 36.91 | 41.51 |
| CDY44371 | Canola | nucleus | 37.25 | 41.42 |
| PGSC0003DMT400040141 | Potato | nucleus | 23.49 | 41.18 |
| CDY10376 | Canola | nucleus | 36.58 | 41.13 |
| PGSC0003DMT400040206 | Potato | nucleus | 23.49 | 40.94 |
| KRH32562 | Soybean | nucleus | 40.6 | 40.6 |
| CDY11255 | Canola | nucleus | 34.56 | 40.55 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 10.4 | 40.26 |
| PGSC0003DMT400001104 | Potato | nucleus | 39.26 | 40.21 |
| CDX80870 | Canola | nucleus | 34.23 | 40.16 |
| PGSC0003DMT400040142 | Potato | nucleus | 22.15 | 40.0 |
| AT5G03510.1 | Thale cress | nucleus | 38.93 | 39.73 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 21.81 | 39.63 |
| PGSC0003DMT400077933 | Potato | nucleus | 20.81 | 39.49 |
| Bra005766.1-P | Field mustard | nucleus | 36.24 | 39.13 |
| PGSC0003DMT400040207 | Potato | nucleus | 21.48 | 39.02 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 8.72 | 37.68 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 8.72 | 37.68 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 8.72 | 37.68 |
| CDY41350 | Canola | nucleus, plastid | 31.21 | 36.9 |
| PGSC0003DMT400018457 | Potato | nucleus | 40.6 | 36.78 |
| CDY71034 | Canola | nucleus | 29.87 | 36.33 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 8.39 | 36.23 |
| Zm00001d036330_P001 | Maize | nucleus | 29.53 | 35.77 |
| Bra034116.1-P | Field mustard | plastid | 33.22 | 35.61 |
| CDY44852 | Canola | nucleus | 37.92 | 34.77 |
| CDX70228 | Canola | nucleus | 37.58 | 34.57 |
| KXG20985 | Sorghum | nucleus, plastid | 30.87 | 33.45 |
| AT5G04390.1 | Thale cress | nucleus | 40.6 | 33.43 |
| KRG96047 | Soybean | mitochondrion | 40.27 | 33.24 |
| CDY58436 | Canola | nucleus | 37.92 | 33.24 |
| CDY08602 | Canola | nucleus | 37.58 | 33.14 |
| CDY11288 | Canola | nucleus | 36.58 | 33.13 |
| Bra009457.1-P | Field mustard | nucleus | 38.26 | 33.04 |
| CDY61764 | Canola | nucleus | 37.58 | 32.94 |
| PGSC0003DMT400090011 | Potato | nucleus | 17.11 | 32.9 |
| CDY00945 | Canola | nucleus | 36.91 | 32.54 |
| Bra029843.1-P | Field mustard | nucleus | 34.9 | 32.0 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 36.91 | 31.98 |
| Bra005803.1-P | Field mustard | nucleus | 38.26 | 31.75 |
| Bra028791.1-P | Field mustard | nucleus | 37.25 | 31.53 |
| Zm00001d051865_P001 | Maize | nucleus | 34.9 | 31.52 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 8.05 | 31.17 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 8.05 | 31.17 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 8.05 | 31.17 |
| Os04t0162500-01 | Rice | vacuole | 29.87 | 30.8 |
| PGSC0003DMT400060463 | Potato | nucleus | 21.48 | 30.77 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 37.25 | 30.75 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 37.25 | 30.41 |
| AT3G10470.1 | Thale cress | nucleus | 40.6 | 30.4 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 36.91 | 30.05 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 36.58 | 29.7 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 33.22 | 28.95 |
| PGSC0003DMT400079773 | Potato | nucleus | 34.9 | 28.26 |
| Zm00001d004439_P001 | Maize | nucleus | 33.89 | 28.13 |
| Zm00001d024866_P001 | Maize | nucleus | 34.23 | 27.87 |
| PGSC0003DMT400021456 | Potato | nucleus | 17.79 | 27.6 |
| CDX89591 | Canola | nucleus | 18.79 | 26.92 |
| EES07783 | Sorghum | nucleus | 35.23 | 26.85 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 32.89 | 26.85 |
| EES10410 | Sorghum | nucleus | 33.89 | 25.19 |
| CDY42128 | Canola | nucleus | 18.79 | 25.11 |
| CDY05027 | Canola | nucleus | 13.76 | 24.55 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009871 | EnsemblPlantsGene:PGSC0003DMG400003872 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | PFAM:PF13912 | PFscan:PS50157 |
| PGSC:PGSC0003DMG400003872 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002961BA5 |
| UniProt:M0ZX27 | MapMan:15.5.15 | : | : | : | : |
Description
ZPT2-11 [Source:PGSC_GENE;Acc:PGSC0003DMG400003872]
Coordinates
chr9:-:4829603..4830786
Molecular Weight (calculated)
33473.8 Da
IEP (calculated)
7.189
GRAVY (calculated)
-0.957
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVHDDRDHD QDQDQQLNMV IKRRRTKRPR PPSPLTLGIT TSSCSTVEGA SSGELVDGHV ANSSSRLNNC GGMIDDKIVR NTNQEEEDMA NCLILLAQGH
101: NYQKSSSLSQ SPTLDVYQCK TCNRSFPSFQ ALGGHRASHK KPKILDDQIK NSKSSDHHQQ VENNIRLKLN NNDDHVTTLS LQMPSNNNNN NNKNKNRVHE
201: CSICGAEFTS GQALGGHMRR HRPLPNSIAI ASNHHIHEES DSHHHDQQIK NNTRTFLSLD LNLPAPEDDH RPENSKFTFA TKEQVIVFSA SPLVDCHY
101: NYQKSSSLSQ SPTLDVYQCK TCNRSFPSFQ ALGGHRASHK KPKILDDQIK NSKSSDHHQQ VENNIRLKLN NNDDHVTTLS LQMPSNNNNN NNKNKNRVHE
201: CSICGAEFTS GQALGGHMRR HRPLPNSIAI ASNHHIHEES DSHHHDQQIK NNTRTFLSLD LNLPAPEDDH RPENSKFTFA TKEQVIVFSA SPLVDCHY
001: MTSVLEESGD HARLVLLIKG KRTKRQRSAS PLMMNAAAVS SVCSGERSSV EVREEEAAGE VEFQGATDED EDMANCLILL SQGHQAKSSD DHLSMQRMGF
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
101: FSNKKPVASL GLGLDGVYQC KTCDKSFHSF QALGGHRASH KKPKLGASVF KCVEKKTASA STVETVEAGA VGSFLSLQVT SSDGSKKPEK THECSICKAE
201: FSSGQALGGH MRRHRGLTIN ANATSAIKTA ISSSSHHHHE ESIRPKNFLQ LDLNLPAPED ERCCEKPKFA FASKDQILLF TAASNSLIDC HH
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.