Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G095320.1 | Barley | nucleus | 19.11 | 100.0 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 21.05 | 98.7 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 21.05 | 98.7 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 20.5 | 96.1 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 18.28 | 95.65 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 18.28 | 95.65 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 18.01 | 94.2 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 91.69 | 90.68 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 91.97 | 90.46 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 91.69 | 90.44 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 13.02 | 61.04 |
| Zm00001d051865_P001 | Maize | nucleus | 54.29 | 59.39 |
| GSMUA_Achr8P12900_001 | Banana | nucleus | 30.19 | 53.96 |
| EES07783 | Sorghum | nucleus | 58.17 | 53.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.53 | 44.98 |
| VIT_06s0061g00760.t01 | Wine grape | nucleus | 32.41 | 40.48 |
| VIT_08s0007g04770.t01 | Wine grape | nucleus | 29.92 | 39.13 |
| KRH67769 | Soybean | nucleus | 23.27 | 38.89 |
| KRG92135 | Soybean | nucleus | 34.9 | 38.53 |
| CDY11027 | Canola | nucleus | 24.1 | 37.66 |
| PGSC0003DMT400009871 | Potato | nucleus | 30.75 | 37.25 |
| Solyc09g008440.1.1 | Tomato | nucleus | 30.47 | 35.48 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 15.51 | 35.22 |
| PGSC0003DMT400001104 | Potato | nucleus | 28.25 | 35.05 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 29.09 | 34.77 |
| CDY04886 | Canola | nucleus | 25.76 | 34.7 |
| Bra028831.1-P | Field mustard | nucleus | 25.76 | 34.7 |
| CDX80870 | Canola | nucleus | 24.38 | 34.65 |
| HORVU1Hr1G006910.1 | Barley | nucleus | 18.28 | 34.38 |
| KRH19960 | Soybean | nucleus | 27.42 | 34.38 |
| Solyc06g074800.1.1 | Tomato | nucleus | 31.02 | 34.36 |
| HORVU3Hr1G086790.2 | Barley | nucleus | 18.84 | 34.34 |
| CDY71034 | Canola | nucleus | 23.27 | 34.29 |
| CDY11255 | Canola | nucleus | 24.1 | 34.25 |
| CDY41350 | Canola | nucleus, plastid | 23.82 | 34.13 |
| KRH30555 | Soybean | nucleus | 29.09 | 34.09 |
| HORVU1Hr1G006920.1 | Barley | nucleus | 17.17 | 34.07 |
| PGSC0003DMT400018457 | Potato | nucleus | 31.02 | 34.04 |
| Solyc11g066400.1.1 | Tomato | nucleus, plastid | 27.7 | 34.01 |
| KRH34655 | Soybean | nucleus | 33.52 | 33.99 |
| CDY44371 | Canola | nucleus | 25.21 | 33.96 |
| KRH32562 | Soybean | nucleus | 27.98 | 33.89 |
| HORVU4Hr1G058720.1 | Barley | nucleus | 17.45 | 33.69 |
| CDX70302 | Canola | nucleus | 24.65 | 33.58 |
| Bra009525.1-P | Field mustard | nucleus | 24.65 | 33.58 |
| CDY10376 | Canola | nucleus | 24.65 | 33.58 |
| HORVU5Hr1G045780.1 | Barley | nucleus | 13.02 | 33.57 |
| HORVU5Hr1G113130.1 | Barley | nucleus | 13.02 | 33.57 |
| HORVU3Hr1G086840.1 | Barley | nucleus | 18.84 | 33.33 |
| AT5G03510.1 | Thale cress | nucleus | 26.87 | 33.22 |
| Bra034116.1-P | Field mustard | plastid | 25.48 | 33.09 |
| KRH25111 | Soybean | nucleus, plastid | 28.81 | 33.02 |
| HORVU5Hr1G113070.1 | Barley | nucleus | 12.74 | 32.86 |
| HORVU4Hr1G058690.1 | Barley | nucleus | 16.9 | 32.45 |
| KRH22825 | Soybean | nucleus | 28.25 | 32.38 |
| HORVU5Hr1G112940.1 | Barley | nucleus | 12.19 | 32.12 |
| Bra005766.1-P | Field mustard | nucleus | 24.38 | 31.88 |
| KRH26537 | Soybean | nucleus, plastid | 27.42 | 31.63 |
| CDX70228 | Canola | nucleus | 27.98 | 31.17 |
| CDY44852 | Canola | nucleus | 27.98 | 31.08 |
| CDY11288 | Canola | nucleus | 28.25 | 31.0 |
| HORVU1Hr1G021410.1 | Barley | plastid | 13.3 | 30.97 |
| CDY61764 | Canola | nucleus | 29.09 | 30.88 |
| CDY58436 | Canola | nucleus | 28.53 | 30.29 |
| AT5G04390.1 | Thale cress | nucleus | 30.19 | 30.11 |
| Bra005803.1-P | Field mustard | nucleus | 29.92 | 30.08 |
| Bra009457.1-P | Field mustard | nucleus | 28.53 | 29.86 |
| HORVU5Hr1G113090.1 | Barley | nucleus | 14.13 | 29.65 |
| CDY08602 | Canola | nucleus | 27.7 | 29.59 |
| Bra029843.1-P | Field mustard | nucleus | 26.59 | 29.54 |
| CDY00945 | Canola | nucleus | 27.42 | 29.29 |
| Bra028791.1-P | Field mustard | nucleus | 28.25 | 28.98 |
| KRG96047 | Soybean | mitochondrion | 28.53 | 28.53 |
| AT3G10470.1 | Thale cress | nucleus | 30.47 | 27.64 |
| Solyc05g055500.1.1 | Tomato | nucleus | 27.42 | 27.35 |
| HORVU5Hr1G112900.1 | Barley | nucleus | 13.85 | 27.32 |
| HORVU5Hr1G112870.1 | Barley | nucleus | 14.4 | 26.94 |
| HORVU5Hr1G112970.1 | Barley | nucleus | 14.13 | 26.84 |
| PGSC0003DMT400079773 | Potato | nucleus | 26.87 | 26.36 |
| CDX89591 | Canola | nucleus | 14.13 | 24.52 |
| CDY42128 | Canola | nucleus | 14.13 | 22.87 |
| HORVU5Hr1G112930.1 | Barley | nucleus | 13.3 | 22.22 |
| HORVU5Hr1G045760.1 | Barley | nucleus | 14.13 | 22.17 |
| CDY05027 | Canola | nucleus | 9.42 | 20.36 |
| HORVU6Hr1G052990.1 | Barley | cytosol, mitochondrion, nucleus | 4.99 | 19.78 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G092750.1 | EnsemblPlantsGene:HORVU6Hr1G092750 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000B482462 | UniProt:A0A287V7G5 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:578137036..578139294
Molecular Weight (calculated)
37620.7 Da
IEP (calculated)
8.649
GRAVY (calculated)
-0.371
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MQASAMELVL FREERTVDDR PQQHGGAVVK RKRTKRPRHQ TPPVACSSAS SSESTTTEEE DMAHCLILLA QGAAPPVDSR PPPPALATVP QEARQGTPSL
101: PPPGPLPAPA TKTERYTSRK YTEAATTADG VRAGFYVYEC KTCNKCFPTF QALGGHRASH KKPRLAGADD DIAANATTVA IAKLSKPPAM KTASPPLAQM
201: TTASPPPPPP PQVDAAPDVT TVLSLNNGGS AVSNAVNTNR LRVHECSICG AEFASGQALG GHMRRHRPLH APADRATATA TAGVTAITVS TTKKGSVPAG
301: INLELDLNLP APSDEECVSH PAPPPPPPSA PPVVLGLGPF DSGKKRLMLT AASAALVDCH Y
101: PPPGPLPAPA TKTERYTSRK YTEAATTADG VRAGFYVYEC KTCNKCFPTF QALGGHRASH KKPRLAGADD DIAANATTVA IAKLSKPPAM KTASPPLAQM
201: TTASPPPPPP PQVDAAPDVT TVLSLNNGGS AVSNAVNTNR LRVHECSICG AEFASGQALG GHMRRHRPLH APADRATATA TAGVTAITVS TTKKGSVPAG
301: INLELDLNLP APSDEECVSH PAPPPPPPSA PPVVLGLGPF DSGKKRLMLT AASAALVDCH Y
001: MEAFEEATKE QSLILKGKRT KRQRPQSPIP FSISPPIVST PENNMEEEYT DLDSKDNALG NDEGNHKKDG VITSSSSSAS WSSQNNHTLK AAEDEEDQDI
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84K31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.