Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G086840.1 | Barley | nucleus | 73.23 | 71.08 |
| TraesCS3D01G350200.1 | Wheat | nucleus | 71.72 | 68.93 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 84.34 | 64.98 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 75.76 | 60.24 |
| Os01t0838600-00 | Rice | nucleus | 61.62 | 56.22 |
| EES03852 | Sorghum | cytosol | 62.12 | 53.25 |
| Zm00001d012430_P001 | Maize | nucleus | 56.57 | 53.08 |
| Zm00001d042934_P001 | Maize | nucleus | 57.07 | 50.22 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 34.85 | 50.0 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 38.38 | 47.8 |
| Solyc05g054650.1.1 | Tomato | plastid | 35.35 | 46.05 |
| GSMUA_Achr11P... | Banana | nucleus | 33.84 | 44.37 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 38.89 | 44.0 |
| KRH70509 | Soybean | nucleus | 38.89 | 42.78 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 28.79 | 42.54 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 36.87 | 41.48 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 34.85 | 41.32 |
| KRG90559 | Soybean | nucleus | 35.35 | 40.46 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 34.85 | 40.35 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 32.32 | 40.25 |
| KRH36195 | Soybean | extracellular | 35.35 | 37.84 |
| HORVU4Hr1G058690.1 | Barley | nucleus | 35.35 | 37.23 |
| HORVU4Hr1G058720.1 | Barley | nucleus | 34.85 | 36.9 |
| HORVU1Hr1G006920.1 | Barley | nucleus | 33.84 | 36.81 |
| HORVU5Hr1G112940.1 | Barley | nucleus | 25.25 | 36.5 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 14.14 | 36.36 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 12.63 | 36.23 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 12.63 | 36.23 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 12.63 | 36.23 |
| HORVU5Hr1G045780.1 | Barley | nucleus | 25.25 | 35.71 |
| HORVU5Hr1G113130.1 | Barley | nucleus | 25.25 | 35.71 |
| HORVU5Hr1G113070.1 | Barley | nucleus | 24.75 | 35.0 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 12.12 | 34.78 |
| HORVU1Hr1G006910.1 | Barley | nucleus | 33.33 | 34.38 |
| HORVU1Hr1G021410.1 | Barley | plastid | 25.76 | 32.9 |
| PGSC0003DMT400060463 | Potato | nucleus | 33.33 | 31.73 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 11.62 | 29.87 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 11.62 | 29.87 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 11.62 | 29.87 |
| HORVU5Hr1G113090.1 | Barley | nucleus | 24.75 | 28.49 |
| HORVU5Hr1G112900.1 | Barley | nucleus | 25.25 | 27.32 |
| HORVU5Hr1G112970.1 | Barley | nucleus | 24.75 | 25.79 |
| HORVU5Hr1G112870.1 | Barley | nucleus | 24.75 | 25.39 |
| HORVU5Hr1G112930.1 | Barley | nucleus | 25.76 | 23.61 |
| HORVU6Hr1G052990.1 | Barley | cytosol, mitochondrion, nucleus | 10.61 | 23.08 |
| HORVU5Hr1G045760.1 | Barley | nucleus | 25.25 | 21.74 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 34.34 | 18.84 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G086790.2 | EnsemblPlantsGene:HORVU3Hr1G086790 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF202 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000B46B30E | UniProt:A0A287M3G7 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:618995280..618995873
Molecular Weight (calculated)
21024.4 Da
IEP (calculated)
10.106
GRAVY (calculated)
-0.434
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKRGRGAWN MELGRLDTAS LLMLLAQQHR QRGVAGAPPA MGGRVFECKT CNRQFPTFQA LGGHRASHKR PRMQHPSPQH ALVGVHDEAA LCLGHRVPQA
101: PPQPPRPRVH ECPVCGLEFA VGQALGGHMR RHRVEPEAGT NAPSSKAAAA ASCDDGGICL DLNLTPSENC VKCKSAAELA AAAGQGVNKA LGGHIRRH
101: PPQPPRPRVH ECPVCGLEFA VGQALGGHMR RHRVEPEAGT NAPSSKAAAA ASCDDGGICL DLNLTPSENC VKCKSAAELA AAAGQGVNKA LGGHIRRH
001: MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
101: QSFGTGQALG GHMRRHRSSM TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Arabidopsis Description
ZAT11ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.