Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P03210_001 | Banana | nucleus | 46.27 | 44.29 |
| GSMUA_Achr11P... | Banana | nucleus | 48.51 | 43.05 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 51.49 | 40.35 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 41.04 | 39.86 |
| GSMUA_Achr5P29140_001 | Banana | nucleus | 50.75 | 39.08 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 29.1 | 39.0 |
| GSMUA_Achr10P... | Banana | nucleus | 51.49 | 38.76 |
| Zm00001d034639_P001 | Maize | nucleus | 43.28 | 38.67 |
| VIT_06s0004g04180.t01 | Wine grape | nucleus | 45.52 | 38.36 |
| EER90627 | Sorghum | cytosol, mitochondrion, nucleus | 41.79 | 38.36 |
| VIT_13s0019g00480.t01 | Wine grape | nucleus | 49.25 | 37.5 |
| KRH01600 | Soybean | cytosol, extracellular, nucleus | 48.51 | 37.14 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 29.85 | 36.36 |
| TraesCS5B01G489400.1 | Wheat | nucleus | 43.28 | 36.25 |
| TraesCS5A01G476500.1 | Wheat | nucleus | 42.54 | 36.08 |
| TraesCS5D01G489800.1 | Wheat | nucleus | 41.79 | 35.67 |
| KRH70509 | Soybean | nucleus | 47.76 | 35.56 |
| Solyc05g054650.1.1 | Tomato | plastid | 40.3 | 35.53 |
| HORVU5Hr1G112820.1 | Barley | nucleus | 41.04 | 34.59 |
| KRG90559 | Soybean | nucleus | 44.03 | 34.1 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 38.06 | 33.55 |
| GSMUA_Achr11P... | Banana | nucleus | 34.33 | 32.62 |
| GSMUA_Achr1P06720_001 | Banana | nucleus | 35.82 | 31.79 |
| KRH36195 | Soybean | extracellular | 43.28 | 31.35 |
| GSMUA_Achr10P... | Banana | nucleus | 38.06 | 31.29 |
| Solyc05g054660.1.1 | Tomato | nucleus, plastid | 38.81 | 31.14 |
| GSMUA_Achr1P01260_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 34.33 | 29.87 |
| HORVU3Hr1G086840.1 | Barley | nucleus | 44.03 | 28.92 |
| TraesCS3A01G356100.1 | Wheat | nucleus | 44.03 | 28.92 |
| HORVU3Hr1G086790.2 | Barley | nucleus | 42.54 | 28.79 |
| TraesCS3D01G350100.1 | Wheat | nucleus | 42.54 | 28.22 |
| Os05t0461200-00 | Rice | cytosol | 42.54 | 27.67 |
| TraesCS3B01G389000.1 | Wheat | nucleus | 42.54 | 27.4 |
| TraesCS1A01G286100.1 | Wheat | nucleus | 36.57 | 27.22 |
| Zm00001d012430_P001 | Maize | nucleus | 42.54 | 27.01 |
| TraesCS3D01G350200.1 | Wheat | nucleus | 41.04 | 26.7 |
| Zm00001d038379_P001 | Maize | nucleus | 36.57 | 26.34 |
| Os01t0838600-00 | Rice | nucleus | 41.79 | 25.81 |
| PGSC0003DMT400060463 | Potato | nucleus | 38.81 | 25.0 |
| GSMUA_Achr11P... | Banana | nucleus | 35.82 | 24.87 |
| EES03852 | Sorghum | cytosol | 42.54 | 24.68 |
| GSMUA_Achr11P... | Banana | nucleus | 35.82 | 24.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.04 | 24.02 |
| Zm00001d042934_P001 | Maize | nucleus | 40.3 | 24.0 |
| EES18355 | Sorghum | nucleus | 37.31 | 23.92 |
| GSMUA_Achr10P... | Banana | nucleus | 32.84 | 23.4 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 29.1 | 23.35 |
| GSMUA_Achr8P12900_001 | Banana | nucleus | 33.58 | 22.28 |
| TraesCS3B01G389100.1 | Wheat | nucleus | 41.79 | 21.79 |
| TraesCS3A01G356200.1 | Wheat | nucleus | 40.3 | 21.69 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P33180_001 | EnsemblPlants:GSMUA_Achr6T33180_001 | EnsemblPlantsGene:GSMUA_Achr6G33180_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF162 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002951DCE |
| UniProt:M0TCB1 | MapMan:15.5.15 | : | : | : | : |
Description
Putative ZOS5-02 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G33180_001]
Coordinates
chr6:-:32317814..32318218
Molecular Weight (calculated)
14485.2 Da
IEP (calculated)
9.074
GRAVY (calculated)
-0.601
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRFGDGEEG EMESMNVADV PTLLTRGGGG EGTISVPSRA SSVRVFWCRT CHRQFPSFQA LGGHRASHKK PRLAEDRHGH ACSVSGLEFA VSQALGGHMR
101: QHCTGGAPHG LTEKKPGKRR GLWLDLNLPP SDDV
101: QHCTGGAPHG LTEKKPGKRR GLWLDLNLPP SDDV
001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
Arabidopsis Description
At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.