Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P06720_001 | Banana | nucleus | 68.1 | 73.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.42 | 45.85 |
| GSMUA_Achr11P... | Banana | nucleus | 51.53 | 43.52 |
| GSMUA_Achr1P01260_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 41.1 | 43.51 |
| GSMUA_Achr11P... | Banana | nucleus | 52.15 | 42.93 |
| GSMUA_Achr9P03210_001 | Banana | nucleus | 35.58 | 41.43 |
| GSMUA_Achr1P03310_001 | Banana | nucleus | 41.72 | 40.72 |
| GSMUA_Achr11P... | Banana | nucleus | 36.81 | 39.74 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 36.2 | 38.82 |
| GSMUA_Achr6P33180_001 | Banana | nucleus | 31.29 | 38.06 |
| GSMUA_Achr5P28550_001 | Banana | nucleus | 39.26 | 37.43 |
| GSMUA_Achr5P29140_001 | Banana | nucleus | 39.88 | 37.36 |
| GSMUA_Achr10P... | Banana | nucleus | 40.49 | 37.08 |
| GSMUA_Achr11P... | Banana | nucleus | 31.29 | 36.17 |
| GSMUA_Achr8P12900_001 | Banana | nucleus | 44.17 | 35.64 |
| GSMUA_Achr8P02630_001 | Banana | nucleus | 20.25 | 33.0 |
| GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 20.86 | 30.91 |
| GSMUA_Achr10P... | Banana | nucleus | 30.06 | 26.06 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P06730_001 | EnsemblPlants:GSMUA_Achr10T06730_001 | EnsemblPlantsGene:GSMUA_Achr10G06730_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF329 |
| PFAM:PF13912 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI000295E42A | UniProt:M0RG00 | MapMan:15.5.15 | : | : | : |
Description
Putative Zinc finger protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G06730_001]
Coordinates
chr10:+:17017327..17017905
Molecular Weight (calculated)
17712.0 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.614
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MANCLILLSR GRALDADPPG TQAAAEETAM ATTGKAAPDV YQCKTCNKCF PSFQALGGHR TSHKKPKADE DRPRVHECSI CGSEFPSGQA LGGHMRRHRP
101: ITPAEPPEAK KEKHVLSLDL NLPAPPDDDR EEPPRPTSSA MPFPFELQQP LVFSASALVD CHY
101: ITPAEPPEAK KEKHVLSLDL NLPAPPDDDR EEPPRPTSSA MPFPFELQQP LVFSASALVD CHY
001: MMMGQDEVGS DQTQIIKGKR TKRQRSSSTF VVTAATTVTS TSSSAGGSGG ERAVSDEYNS AVSSPVTTDC TQEEEDMAIC LIMLARGTVL PSPDLKNSRK
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
101: IHQKISSENS SFYVYECKTC NRTFSSFQAL GGHRASHKKP RTSTEEKTRL PLTQPKSSAS EEGQNSHFKV SGSALASQAS NIINKANKVH ECSICGSEFT
201: SGQALGGHMR RHRTAVTTIS PVAATAEVSR NSTEEEIEIN IGRSMEQQRK YLPLDLNLPA PEDDLRESKF QGIVFSATPA LIDCHY
Arabidopsis Description
ZAT5Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.